Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001298625.1_202015-11- 04] 24 sequences; 11,734,173 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq11 161 2e-34 seq5 156 8e-33 seq12 150 4e-31 >seq11 Length=632881 Score = 161 bits (178), Expect = 2e-34 Identities = 173/226 (77%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATA 192357 ||| ||| ||||||||||| | | || |||||||||||||| | | |||| || || Sbjct 600537 GTTCAATGATACCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGA-ATG 600595 Query 192358 TTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGT 192417 || || || || || |||| | || |||||||| |||||||||||||| ||||| ||| Sbjct 600596 TTGTAGTCGGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGT 600655 Query 192418 TGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCT 192477 || |||||||| || |||||||| ||||| || || ||| ||||| || | || Sbjct 600656 TGGTCAGGTGGGATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCA 600715 Query 192478 GACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAA 192523 || ||||| ||||||||||| ||||| |||||||| || || |||| Sbjct 600716 GAAGATTCAACTTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAA 600761 >seq5 Length=401362 Score = 156 bits (172), Expect = 8e-33 Identities = 172/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358 ||| ||| ||||||||||| | | || |||||||||||||| | || || ||||| Sbjct 47689 GTTCAATGATACCACCTCTCAATCTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATAT 47630 Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418 | || ||||| || |||| | || |||||||| |||||||||||||||||||| |||| Sbjct 47629 TGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTT 47570 Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478 | ||||| || || ||||| || ||||| || || || ||||| || | || | Sbjct 47569 GGTCAGGAGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATGGTGTCAG 47510 Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAA 192527 | ||||| ||||| | ||| ||||| |||||||| || ||||| | ||| Sbjct 47509 AAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAA 47461 >seq12 Length=1033978 Score = 150 bits (166), Expect = 4e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | || || || |||||||| | ||| || ||| || || ||||| Sbjct 476398 ACCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGA 476339 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || |||| | || |||||||| |||||||||||||| ||||| ||||| |||||||| Sbjct 476338 CAAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 476279 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || ||||| || ||||| || ||| || ||||| |||| ||||| ||||| || Sbjct 476278 AATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAAC 476219 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||| || ||||| || ||||| ||||| || || | || || ||||| || Sbjct 476218 TTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 476168 Score = 98.7 bits (108), Expect = 2e-15 Identities = 157/222 (71%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 192298 AGTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGAT 192356 |||||||| | |||||||| || | || || || || | ||| | ||| ||| || || Sbjct 67055 AGTTTAAT--TGCCACCTCTTAGTCTTAGGACCAAGTGCAGAGTGGACTCCTTTTGA-AT 67111 Query 192357 ATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTG 192416 ||||| || || || |||| |||| ||||| || ||||||||||| || ||||| || Sbjct 67112 GTTATAGTCCGACAAAGTTCTACCATCCTCCAACTGCTTACCAGCAAAAATCAATCTTTG 67171 Query 192417 TTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATC 192476 ||| || || || || ||||| || ||||| || || || || || || | || Sbjct 67172 TTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTC 67231 Query 192477 TGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGT 192518 || || || || |||| || ||||| ||||| || || || Sbjct 67232 AGAAGACTCGACCTCTAAGGTTATGGTCTTACCGGTCAAAGT 67273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984479697272400