Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001298625.1_202015-11- 04] 24 sequences; 11,734,173 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq6 239 1e-57 seq5 122 3e-22 seq4 116 1e-20 seq13 93.3 1e-13 seq9 84.2 6e-11 >seq6 Length=588913 Score = 239 bits (264), Expect = 1e-57 Identities = 619/934 (66%), Gaps = 12/934 (1%) Strand=Plus/Minus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCT-TGTCGTCGCTGTATTCTACAATCTCA 155645 ||| ||| |||| ||||| || |||||||| | || | | |||||| ||||| ||| Sbjct 303296 CAACAGAAGCCAAGTTACAAACAGCAGTCTCATCTGGAGCAGA-GTATTCAACAATTTCA 303238 Query 155646 CAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAA 155705 ||||||| ||||| |||||| || || ||||| ||||| ||||| ||||||||| Sbjct 303237 CAGCACAAATTAGATGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCTGTTACAA 303178 Query 155706 GCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGC 155765 ||||||||||| | || |||| || || || ||| | ||||| |||| || | Sbjct 303177 GCATCCTTGTAAACAACAAATGGTGTACCAGTTTCCGTTTGTGCTTCCAAGATAGAGTAC 303118 Query 155766 CAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATAC 155825 || | | |||| || || ||| | ||||| || || |||| Sbjct 303117 CATAATTTTTGGGCCTTGATAGTCTTACCA---CGACCTTCTTTTTCGTAACGGGTATAT 303061 Query 155826 AGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG-CACTTATCGGGGCAAAA 155884 || | | | | || ||||||||||| ||||||| || ||| || | | || | | || Sbjct 303060 AGGGCTTCGAATTCATCACCGTAACAGTCACTCAAGCCTGGGGCAGATGTAGGAG-AGAA 303002 Query 155885 CAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGC 155944 | | |||| | || | ||||||| ||| || | ||| |||| | ||| Sbjct 303001 TAAAGTCCAAGTGCCGTTTTCTTCGACACGCTTCATGAAAAGATCTGGAACCCATAGAGC 302942 Query 155945 ATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAA 156004 ||| | || ||||| || || | ||||||||||| | | || | ||| Sbjct 302941 TGGGAATAAATCTCTTGCACGGATTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAA 302882 Query 156005 TTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG-- 156062 || ||||||| || |||||||| ||| | ||||| |||| |||||| Sbjct 302881 GTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGGGCAAAGGCACCAGGTCTCTTGTT 302822 Query 156063 -CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACC 156121 ||||| || || ||||| || ||||| || |||||||||| | ||||||||| | || Sbjct 302821 ACCACCTTGGTCAACATAACGGGCAGTATTGTTGAAGACACGGATCATAGGAATTAACCC 302762 Query 156122 ATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATG 156181 || ||||| || || || || ||| | || || | || |||| || || ||||| Sbjct 302761 GTTAGAAGTCCCGTTTGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGGATATG 302702 Query 156182 TAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAAT 156241 ||| |||||||| || | ||||||||| ||| |||||||| | ||||| | |||| Sbjct 302701 TAGACCAATACCTCCAGCAGTTTTAGAAATCAAAGCACATTCCTTCAAAGTATCGTAAAT 302642 Query 156242 ACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGG 156301 ||||||||| |||||||| | ||||| | || | || || | |||||| ||| Sbjct 302641 ACCTTCAATGGAATCATCCTTCATTGCAACTAAGAAACAGGAGGACATTTGAGGCTTTGG 302582 Query 156302 TGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAATC 156361 || ||||||||||||| || || | |||||| |||| || || |||||| | | Sbjct 302581 AGTACCAGCGTTGAATAAAGTTGGAGAGGCATGAGTAAAGTATTTTAGAGACATTAAGTT 302522 Query 156362 GTATGTCTCCTTAATC-TTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATCC 156420 || || | || || | ||||| || |||||||||| | | ||| ||||| Sbjct 302521 ATAGGT-TTCTAAAGCGGCCTCAATGTTTTCACCGTGAATACCTAGGGCGACTCTCATGA 302463 Query 156421 ACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCA 156480 | ||||| ||||| || ||| || | |||| || | ||| | ||||||| Sbjct 302462 TTAAGTGCTGTGGACGTTCAGCAACTTGACCGTTGATTCTCAATAAGTAAGAACGTTCCA 302403 Query 156481 GAGTTTTAAACCCGAAATAATCAAACAGAAAATC 156514 |||||| || ||||| ||| | || |||| || Sbjct 302402 AAGTTTTGAAACCGAAGTAACTATACTGAAAGTC 302369 >seq5 Length=401362 Score = 122 bits (134), Expect = 3e-22 Identities = 291/440 (66%), Gaps = 0/440 (0%) Strand=Plus/Plus Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119 || ||||| || || || || || ||||| || |||||||||| | ||| ||||| | Sbjct 213124 TTACCACCTTGGTCCACGTAACGTGCAGTGTTGTTGAAGACACGGATCATGGGAATCAAC 213183 Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179 || || ||||| || ||||| || ||||| || || | || |||| ||| | ||| Sbjct 213184 CCGTTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGTGGAACGAATATTGTTGATA 213243 Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239 || || |||| |||||||| || ||||| || || || || | ||| | | || Sbjct 213244 TGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAA 213303 Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299 ||||||||||| || || || | ||| | | || | || ||| | |||||| || Sbjct 213304 ATACCTTCAATGGAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATTTGAGGATGT 213363 Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAA 156359 || || || || || |||||||| || | || || | || || | ||||| | Sbjct 213364 GGCGTACCGGCATTAAATAGTGTGGGGGAAGCGTGGGTGAAGTATCTCAACGACATCAAG 213423 Query 156360 TCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATC 156419 | ||| |||| | | ||| | || |||||||||| | | || | ||| Sbjct 213424 TTGTAAGTCTTCAGCACGGACTCGATATCGCTGCCGTGAATACCTAGGGCCACACGCATG 213483 Query 156420 CACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCC 156479 || ||| || ||||| || | | | || || | || || ||||| | |||||| Sbjct 213484 ACCAAATGTTGGGGACGTTCGGCCACTTCACCGTCTAGTCTTAGCAGGTAGGAACGTTCC 213543 Query 156480 AGAGTTTTAAACCCGAAATA 156499 ||||| |||||||| ||||| Sbjct 213544 AGAGTCTTAAACCCAAAATA 213563 >seq4 Length=982538 Score = 116 bits (128), Expect = 1e-20 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598 |||||| ||| | || ||| || ||| || ||||| | | |||| ||||||||| Sbjct 198376 TTTCTTGTGGTGTTGTCGTAATGAACCATGATATCTTCTAGAGCTTTGACTAAACGACGT 198435 Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 ||||||||||| ||| || |||||| ||||| ||||| || ||||| ||||||||||| Sbjct 198436 TGAATATAACCTGTTTCAGCTGTTTTAACAGCAGTATCGATAAGACCTTCACGACCACCC 198495 Query 302659 ATAGCATGGAAGAATAGCTCTT 302680 || ||||||||||| | ||||| Sbjct 198496 ATTGCATGGAAGAAAAACTCTT 198517 Score = 95.1 bits (104), Expect = 4e-14 Identities = 104/138 (75%), Gaps = 3/138 (2%) Strand=Plus/Plus Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874 |||||| | | ||| |||||||| || || || |||||| || ||||| || || Sbjct 197637 AATTTCCTTTAAACGCGGAACACCGGAAGTGACTTT---CTTGGAAGCCACACCGGCGAA 197693 Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCAT 301934 |||||||||||||| || | ||| |||| ||||||||| ||| ||| || |||| | Sbjct 197694 ATGGAAAGTATTCAGTGTCATTTGTGTAGCTGGCTCACCGATAGATTGAGCTGCAAGAAC 197753 Query 301935 ACCAACCATTTCTCCTGG 301952 |||||||||||| || || Sbjct 197754 ACCAACCATTTCACCAGG 197771 >seq13 Length=953685 Score = 93.3 bits (102), Expect = 1e-13 Identities = 216/325 (66%), Gaps = 3/325 (1%) Strand=Plus/Plus Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTA 288969 ||||| ||||||| | || | | | |||| |||||||| || |||||||| Sbjct 439175 GCCAAGACAACAACATGATCAGCTGGAGTAAAGCCATCCATTTCCACCAACATTTGATTT 439234 Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttA 289029 | ||| | ||| ||||||||||| | ||| ||| ||| | || ||| Sbjct 439235 AATGTGTTTTCTCTTTCATCATTAGCGCCTGAGAAATTACC---TTTTTGTCTAGCTTTC 439291 Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089 || | |||||||||||||||||| || | | | |||| |||| ||| ||| || Sbjct 439292 CCGATAGCATCAATTTCGTCAATAAACACGATCGAAGGAGCGTTTTCTCTTGCAGTTTTG 439351 Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149 || || |||||||| | | || || | ||| ||| ||||||| ||||| || ||| || Sbjct 439352 AACAAATCTCTTACCCTTGCAGCACCGACACCTACAAACATTTCAACAAACTCTGAACCG 439411 Query 289150 GATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTA 289209 || || | ||||| || || || ||||| |||| |||| || | || ||| Sbjct 439412 GAAACAAAATAGAATGGGACGCCGGCCTCACCTGCAGTTGCCTTCGCAAGCAAGGTTTTA 439471 Query 289210 CCTGTTCCAGGTGGTCCCTCTAATA 289234 || || || ||||| || ||||| Sbjct 439472 CCGGTACCTGGTGGACCAGATAATA 439496 >seq9 Length=813827 Score = 84.2 bits (92), Expect = 6e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 || || | |||||||||| ||||||||||| |||||||| || | || || | Sbjct 382088 TGCGCCACAGTCATACGAGATGGAATAGCATGAGGATTGATAATTAAATCTGGAACGATA 382147 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTTG 251957 || || || || || ||||||| ||| || | ||| || | |||||||| |||||||| Sbjct 382148 CCTTCTGCTGTAAATGGCATAT-CTTCTCTACGATATGTGATACCAATAGTACCCTTTTG 382206 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 || ||||||||| ||| || ||||| || Sbjct 382207 ACCATGACGAGAAGCGAATTTGTCACCGAT 382236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817147416088