Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001298625.1_202015-11- 04] 24 sequences; 11,734,173 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq5 199 8e-46 seq11 163 6e-35 seq12 154 3e-32 >seq5 Length=401362 Score = 199 bits (220), Expect = 8e-46 Identities = 176/220 (80%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | || |||||| || | ||| ||||| || || ||||| || |||| Sbjct 47680 TACCACCTCTCAATCTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAG 47621 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | ||||||||||||| | ||| || ||||||||||||| ||||||||| || |||| Sbjct 47620 ACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAG 47561 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| ||||||||||||| || ||||| ||||| || ||| || ||| | Sbjct 47560 GGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATGGTGTCAGAAGATTCAA 47501 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801 |||||||||| || ||||| || ||||| || || ||||| Sbjct 47500 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAA 47461 >seq11 Length=632881 Score = 163 bits (180), Expect = 6e-35 Identities = 168/220 (76%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | || ||||| || | ||| ||||| || || || || || || | Sbjct 600546 TACCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGG 600605 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | ||||||||||||| | ||| || ||||||||||| | ||||||||| || || | Sbjct 600606 ACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 600665 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| || ||||||||||| | ||| ||||| ||||| || ||| || ||| | Sbjct 600666 GGATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAA 600725 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801 |||| | ||| || ||||| || ||||| ||||| || || Sbjct 600726 CTTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 600765 >seq12 Length=1033978 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| |||||||| | || || ||||| | ||| || || || || || || || ||||| Sbjct 476398 ACCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGA 476339 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | | |||| |||||||| | ||| || ||||||||||| | ||||||||| || || || Sbjct 476338 CAAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 476279 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || |||||||| ||||||||||| | || ||||| ||||| || || || ||| || Sbjct 476278 AATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAAC 476219 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| | || || ||||| || || || ||||| || || || ||||| Sbjct 476218 TTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 476171 Score = 138 bits (152), Expect = 2e-27 Identities = 147/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 || || ||||||||||| || || || || || ||||| || || | | ||||||| || Sbjct 67080 AGGACCAAGTGCAGAGTGGACTCCTTTTGAATGTTATAGTCCGACAAAGTTCTACCATCC 67139 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || | || || |||||||| || | ||||||||| |||||||| || |||||||| ||| Sbjct 67140 TCCAACTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCT 67199 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 |||||||| | || || || || ||||| ||| || || || || || ||||| ||| Sbjct 67200 TGAATCTTGGACTTGACGTTGTCGATCGTGTCAGAAGACTCGACCTCTAAGGTTATGGTC 67259 Query 82779 TTGCCTGTCAACGT 82792 || || ||||| || Sbjct 67260 TTACCGGTCAAAGT 67273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826898088136