Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001298625.1_202015-11- 04] 24 sequences; 11,734,173 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq6 170 5e-37 seq4 113 1e-19 seq5 107 5e-18 seq9 98.7 2e-15 seq13 93.3 1e-13 seq2 93.3 1e-13 >seq6 Length=588913 Score = 170 bits (188), Expect = 5e-37 Identities = 564/865 (65%), Gaps = 18/865 (2%) Strand=Plus/Plus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 || || |||||||||||| | |||||| |||| ||| | | |||| || | | | Sbjct 302384 TACTTCGGTTTCAAAACTTTGGAACGTTCTTACTTATTGAGAATCAACGGTCAAGTTGCT 302443 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 |||||||| || ||| | | | | || || | |||||||| || | | ||| | Sbjct 302444 GAACGTCCACAGCACTTAATCATGAGAGTCGCCCTAGGTATTCACGGTGAAAACATTGAG 302503 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483 || | | | ||| ||| | || | | ||| | || |||||| |||| || Sbjct 302504 GCCGCTTTAGAAACCTATAACTTAATGTCTCTAAAATACTTTACTCATGCCTCTCCAACT 302563 Query 110484 CTATTTAACGCAGGAACT--AATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATT 110540 |||| ||||| || ||| || | ||| || | || || |||||| | | ||| Sbjct 302564 TTATTCAACGCTGGTACTCCAAAGCCT--CAAATGTCCTCCTG-TTTCTTAGTTGCAATG 302620 Query 110541 AACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAA 110600 || |||||||| |||||||||||||| ||| || | || ||| |||| | ||||||||| Sbjct 302621 AAGGATGATTCCATTGAAGGTATTTACGATACTTTGAAGGAATGTGCTTTGATTTCTAAA 302680 Query 110601 AACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCA 110660 | ||||||| |||||| | || | || | ||||| ||| || | | || || Sbjct 302681 ACTGCTGGAGGTATTGGTCTACATATCCACAACATTCGTGCAACCGGCTCTTACATTGCT 302740 Query 110661 ACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCA 110720 | || || |||| | || | |||| ||| | | ||||||||| | ||||| Sbjct 302741 GGTACAAACGGGACTTCTAACGGGTTAATTCCTATGATCCGTGTCTTCAACAATACTGCC 302800 Query 110721 AAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCT 110777 ||||| | ||||||||| |||||| ||| | ||||| | ||| | || || Sbjct 302801 CGTTATGTTGACCAAGGTGGTAACAAGAGACCTGGTGCCTTTGCCCTATATTTGGAGCCA 302860 Query 110778 TGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAA 110837 ||||| | ||||| || || ||| | || || | || ||||| || |||||| Sbjct 302861 TGGCACGCTGATATCTTCGACTTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAATC 302920 Query 110838 AGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAA 110897 | ||| | |||||||| || | ||| || ||||| | |||||||| ||||| || Sbjct 302921 CGTGCAAGAGATTTATTCCCAGCTCTATGGGTTCCAGATCTTTTCATGAAGCGTGTCGAA 302980 Query 110898 GAAAATGGCATGTGGTCTCTTATGTGTCCT-CATCGTTCTCCTGGTCTATCTGA-TGTAT 110955 ||||| |||| ||| || | | | |||| |||| | | || || | ||| ||| | Sbjct 302981 GAAAACGGCACTTGGACTTTATTCTCTCCTACATC-TGCCCCAGGCTTGAGTGACTGT-T 303038 Query 110956 ATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAAC 111015 | || | || || |||| ||| || || |||||||||| || | || Sbjct 303039 ACGGTGATGAATTCGAAGCCCTATATACCCGTTACGAAAAAGAAG----GTCGTGGTAAG 303094 Query 111016 AAATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACT 111074 | || | || ||| || | |||| | ||| | ||| ||||| |||||||| || Sbjct 303095 ACTATCAAGGCCCAAAAATTATGGTACTCTATCTTGGAAGCACAAACGGAAACTGGTACA 303154 Query 111075 CCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACA 111134 || | | || | || || ||| | ||| | ||||| || |||| ||| || || Sbjct 303155 CCATTTGTTGTTTACAAGGATGCTTGTAACAGGAAATCCAACCAAAAGAACTTGGGTGTT 303214 Query 111135 ATTAAGTCTAGTAATTTGTGCTGTG 111159 || ||||| |||||||||||||| Sbjct 303215 ATCAAGTCATCTAATTTGTGCTGTG 303239 Score = 95.1 bits (104), Expect = 3e-14 Identities = 318/490 (65%), Gaps = 9/490 (2%) Strand=Plus/Plus Query 112956 GATTGGAAAAATCTTAAAGATAGTGTTATGAAACATGGAACTACAAACTCTCTACTGTTG 113015 |||||| | | ||| | | ||| | ||| | ||||| | || ||||||| | || Sbjct 303701 GATTGGGACACTCTGAGAAATAACATCATGGAGCATGGTATTAGAAACTCTTTGACCATG 303760 Query 113016 GCACCAATGCCTACAGCTTCGACTGCACAGATTCTCGGTAATAATGAATGTTTCGAGCCA 113075 ||||| |||||||| || || || | ||||| | ||| | || || |||||||| ||| Sbjct 303761 GCACCTATGCCTACTGCATCCACATCTCAGATCTTAGGTTACAACGAGTGTTTCGAACCA 303820 Query 113076 ATTACAAGTAATATTTATGTCCGACGTGTTCTAGCAGGTGAGTTTGTACTTTGTAATAAA 113135 |||| || || ||| || ||||| ||| | ||||| ||| | | ||| | Sbjct 303821 GTTACTTCCAACATGTATTCTCGTCGTGTCCTATCTGGTGAATTTCAAGTCGTCAATCCA 303880 Query 113136 TATCTGCAAGAAGAACTTCTCGGAATCGGTAAATGGAACAATGAAGTGAAAAACTCCATT 113195 || || || | ||| | |||| ||| | ||| |||| | | | Sbjct 303881 TACTTGTTGCGTGATTTGGTCGATTTGGGTATTTGGGATGATGGTATGAAGCAATATCTA 303940 Query 113196 ATTGCTAATCAAGGTTCGGTTCAACATCTA--AAAT-TGCCTGATTGCGTGAAAGATGTA 113252 || | | | ||||| ||||| | || |||| |||| | |||||||| | Sbjct 303941 ATCACACAAAATGGTTCCATTCAAGGTTTACCAAATGTGCCACAAGAATTGAAAGATTTG 304000 Query 113253 TTTAAGACTATTTGGGAAATTAAGCAACGTGTCGTAATTGATATGGCTGCAGATCGTGGC 113312 | ||| ||| ||||||||||| ||| | ||| | ||||| || || |||| | Sbjct 304001 TATAAAACTGTTTGGGAAATTTCACAAAAGACAATCATTAACATGGCAGCCGACCGTGCC 304060 Query 113313 AAGTTTATCGATCAATCTCAGTCGATGAACTTATTTATGCCGGACACCTCACCAGATAAG 113372 | | ||||| |||||||| || |||| ||||| ||| | | | | | |||| Sbjct 304061 ATTTACATCGACCAATCTCACTCTTTGAATTTATTCTTGCGTGCCCCAACTATGGGTAAG 304120 Query 113373 GTGACA--TCTGCTCTATTT-TACGGCTGGAAAAAAGGTTTAAAAACAGGTATGTATTAT 113429 | ||| | ||| |||| ||||||||||| || ||| |||| || |||||||||||| Sbjct 304121 CTAACAAGTATGC---ATTTCTACGGCTGGAAGAAGGGTCTAAAGACCGGTATGTATTAT 304177 Query 113430 TTGCGAACAC 113439 ||| |||||| Sbjct 304178 TTGAGAACAC 304187 >seq4 Length=982538 Score = 113 bits (124), Expect = 1e-19 Identities = 138/184 (75%), Gaps = 6/184 (3%) Strand=Plus/Minus Query 305318 GACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCT 305377 || |||||| ||||| ||||| | ||||| || || ||||||||||||||||||||| Sbjct 199637 GATAATGATCCAGTTCTTTTCAACCGTCAACCTTCGCTTCATAAAATGTCTATGATGGCT 199578 Query 305378 CATAAAGTCAAAGTATTATCTGGATT-GACATTTCGATTAAATGTAAGTGCTT--GTACG 305434 || | ||| ||||| | || ||| ||||| |||| ||| | || | | | | Sbjct 199577 CACAGAGTGAAAGT-TATTCCATATTCTACATTCAGATTGAATTT--GTCCGTCACTTCT 199521 Query 305435 CCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCAAAGGTT 305494 || |||||||| ||||||||||| |||||||||||| | || || |||||||| ||| Sbjct 199520 CCATATAATGCCGATTTTGATGGTGATGAAATGAATCTTCACGTTCCTCAATCTGAGGAG 199461 Query 305495 ACAA 305498 |||| Sbjct 199460 ACAA 199457 >seq5 Length=401362 Score = 107 bits (118), Expect = 5e-18 Identities = 263/398 (66%), Gaps = 3/398 (1%) Strand=Plus/Minus Query 110511 CAATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGAT 110570 ||| || ||||||| || || | | || || || || || |||||||||||||| || Sbjct 213356 CAAATGTCTTCTTGTTTCCTGATTGCCATGAAGGACGACTCCATTGAAGGTATTTACGAC 213297 Query 110571 GCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCAT 110630 || | ||||| ||| | ||||| || | | || || ||||| |||| | | Sbjct 213296 ACTTTGAAAGAGTGTGCCATGATTTCCAAGACTGCAGGTGGTGTTGGTCTTCATATCAAC 213237 Query 110631 GATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTT 110690 ||||||| || | ||| | |||| ||| | || ||| |||||| || | || Sbjct 213236 AATATTCGTTCCACAGGCTCTTATATTGCAGGTACCAACGGTACTTCAAACGGGTTGATT 213177 Query 110691 CCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGT---AAGAGA 110747 || ||| | | ||||||||| |||||||| || ||| | ||||||||| |||||| Sbjct 213176 CCCATGATCCGTGTCTTCAACAACACTGCACGTTACGTGGACCAAGGTGGTAACAAGAGA 213117 Query 110748 AATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAA 110807 || | ||||| | | | || || |||||| |||| || || || || | || Sbjct 213116 CCCGGTGCCTTTGCCCTTTTCTTGGAGCCATGGCATGCAGACATCTTCGACTTTGTCGAT 213057 Query 110808 CTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGG 110867 | | || | ||| || |||||| | ||| | ||||| || ||| | ||| Sbjct 213056 ATCAGAAAGACTCATGGTAAGGAAGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGG 212997 Query 110868 ATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGG 110905 ||| | ||| | |||||||| ||||| |||| |||| Sbjct 212996 ATTCCCGATCTTTTCATGAAGCGTGTCGAAGAGGATGG 212959 >seq9 Length=813827 Score = 98.7 bits (108), Expect = 2e-15 Identities = 133/182 (73%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 305306 AGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATG 305365 ||||||||| | ||| |||| |||| | |||||| | |||||||| || |||| | | Sbjct 317572 AGACATTTGGAAGACGGTGATGTGGTTTTATTCAATCGTCAACCATCTCTACATAGACTA 317513 Query 305366 TCTATGATGGCTCATAAAGTCAAAGTATTATC--TGGATTGACATTTCGATTAAATGTAA 305423 || || || | ||| | | | ||| | || |||| || ||| || |||||| | Sbjct 317512 TCGATTTTGTCACATTACG-CGAAGATTCGTCCATGGAGA-ACTTTTAGACTAAATGAAT 317455 Query 305424 GTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTC 305483 ||| ||| || |||||||| || ||||||||||| || ||||||||| | ||||| || | Sbjct 317454 GTGTTTGCACACCTTATAACGCAGATTTTGATGGTGACGAAATGAATTTACATGTTCCAC 317395 Query 305484 AA 305485 || Sbjct 317394 AA 317393 >seq13 Length=953685 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 167643 TCGATGAAACTTTTCCAGATTTTTATCGAACCACGTCGTTTGCATTCATCGTAAAAACCA 167702 ||||| ||| |||||||||| || || || ||| || || || ||||||||||| ||| Sbjct 240734 TCGATAAAAGTTTTCCAGATCTTGATATTACAACGACGCTTACACTCATCGTAAAATCCA 240793 Query 167703 TAGTCTCTTGAGATATCAGCACATTCGTGATTTCCTCTTAATAAAA 167748 ||| |||||| || || ||||||||||| || ||||||| |||| Sbjct 240794 TAGACTCTTGTGACATTGGCACATTCGTGGTTGCCTCTTAGCAAAA 240839 >seq2 Length=1274804 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 167643 TCGATGAAACTTTTCCAGATTTTTATCGAACCACGTCGTTTGCATTCATCGTAAAAACCA 167702 |||||||| ||||||||||||| || || ||||||||| || ||||| ||||| ||| Sbjct 1097445 TCGATGAATGTTTTCCAGATTTTGATATTACAACGTCGTTTACACTCATCATAAAATCCA 1097386 Query 167703 TAGTCTCTTGAGATATCAGCACATTCGTGATTTCCTCTTAA 167743 || |||||| | || |||||||||||||| ||||| || Sbjct 1097385 TAAACTCTTGTTACATTGGCACATTCGTGATTACCTCTCAA 1097345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812435055064