Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001298625.1_202015-11- 04] 24 sequences; 11,734,173 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq5 134 2e-26 seq12 132 5e-26 seq11 113 5e-20 seq6 93.3 5e-14 >seq5 Length=401362 Score = 134 bits (148), Expect = 2e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 |||||||| || | || || ||||| || ||| | || ||||| || ||| | |||| Sbjct 47461 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 47520 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || ||||| |||||||| || || ||||| ||||| || | || Sbjct 47521 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTA 47580 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || ||||||||||||||| | || || | | | ||| | | ||||| ||| |||||||| Sbjct 47581 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAATATCCAAAAG 47640 Query 27595 GAATCCACTCTTCATCTAGTCTTG 27618 ||||||||| | ||| |||| ||| Sbjct 47641 GAATCCACTTTACATTTAGTTTTG 47664 Score = 123 bits (136), Expect = 3e-23 Identities = 288/432 (67%), Gaps = 17/432 (4%) Strand=Plus/Plus Query 81313 TCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC---- 81368 |||| |||||| | |||||| |||||||||||||||| | | ||| | | || Sbjct 213058 TCGACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAAAAGGGCAAAGGCACCGGGT 213117 Query 81369 --CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATA 81426 |||| || |||| |||| |||||||| ||||| ||| || ||||| | ||| Sbjct 213118 CTCTTGTTAC---CACCTTGGTCCACGTAACGTGCAGTGTTGTTGAAGACACGGATCATG 213174 Query 81427 GGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACC 81486 || || | || | ||| |||||| ||||| | ||| || || ||| || | Sbjct 213175 GGAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGTGGAACGAATA 213234 Query 81487 TTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATG 81546 ||| |||| |||||| | ||||||| ||| |||||| |||||| |||| Sbjct 213235 TTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAA 213294 Query 81547 GTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATC 81606 || || ||||| || || ||| || | |||||| ||| || |||||| ||||| Sbjct 213295 GTGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATT 213354 Query 81607 TGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTT 81666 ||||| | | |||||||| || ||||| |||| ||||| |||| || | Sbjct 213355 TGAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGGAAGCGTGGGTGAAGTATCTCAAC 213414 Query 81667 GACATCAGGTCATAGGTTTCCTTGACGCGTGGA----ATATCGTCACCGTGAATACCGAT 81722 ||||||| || || || ||| | || ||| |||||| ||||||||||| | Sbjct 213415 GACATCAAGTTGTAAGT---CTTCA-GCACGGACTCGATATCGCTGCCGTGAATACCTAG 213470 Query 81723 AGCTACACGCAT 81734 || |||||||| Sbjct 213471 GGCCACACGCAT 213482 Score = 82.4 bits (90), Expect = 9e-11 Identities = 112/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007 ||||||||||||| ||||| || || || || || ||||||||||||| ||||| | Sbjct 212696 ACTCGACGATTTCGCAACACAAGTTTGACGATTTGATGGTACCCAGGTTTTGTTGGTTGG 212755 Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067 ||| ||| || || ||||| || |||| | || |||||||| || |||| || Sbjct 212756 TCTTTCTGTTACAGGCATCCTTATAAACCATGAAGGGTGTACCGGTTTCTGTTTGTG-CT 212814 Query 81068 TG-AGGATGGCGTCCCAAATCTCGCGCGCCTTGA 81100 || | |||||||| ||| | || | ||||||| Sbjct 212815 TGCAAGATGGCGTACCATACCTTTTGAGCCTTGA 212848 >seq12 Length=1033978 Score = 132 bits (146), Expect = 5e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | ||||| ||||||||||| ||||| ||||| || Sbjct 476171 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCTTCA 476230 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||| |||| ||||| |||||||| || ||||| || ||||| Sbjct 476231 GACACTATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAA 476290 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || ||||||||||||||| | || || | | || | | ||||| || Sbjct 476291 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTACAAC 476350 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||||||||| |||||| | || | |||||| Sbjct 476351 ATCCAAAAGGAGTCCACTTTACACTTGGTCTTG 476383 Score = 111 bits (122), Expect = 2e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||| ||||| || || | ||||| ||||| ||| | || | || | ||| | Sbjct 67267 ACCGGTAAGACCATAACCTTAGAGGTCGAGTCTTCTGACACGATCGACAACGTCAAGTCC 67208 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || ||||| |||||||| || |||||||||||||| || | | ||||||||||||||| Sbjct 67207 AAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAAAGATTGATTTTTGCTGGTAAG 67148 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 || | ||||||| | | || | | |||||||| | |||||||| |||||||| || Sbjct 67147 CAGTTGGAGGATGGTAGAACTTTGTCGGACTATAACATTCAAAAGGAGTCCACTCTGCA 67089 >seq11 Length=632881 Score = 113 bits (124), Expect = 5e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| | || || ||||| || ||||| || ||||| || ||| | ||| Sbjct 600766 CTTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCAT 600707 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 || ||| | || | || ||||| ||||| || || || || || ||||| || | | Sbjct 600706 TGACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATT 600647 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || ||||||||||||||| | || || | | | ||| | | ||||| || | ||||| Sbjct 600646 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAA 600587 Query 27594 GGAATCCACTCTTCATCTAGTCTTG 27618 |||||||||| | ||| |||||||| Sbjct 600586 GGAATCCACTTTACATTTAGTCTTG 600562 >seq6 Length=588913 Score = 93.3 bits (102), Expect = 5e-14 Identities = 134/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 80043 CAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAG 80102 || ||| ||||| || ||||| || ||||||||||||||||| | |||||| | || Sbjct 304180 CAAATAATACATACCGGTCTTTAGACCCTTCTTCCAGCCGTAGAAATGCATACTTGTTAG 304121 Query 80103 CTT-CGCA-AGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATGAAA 80160 ||| | || ||| ||||| | || ||| | |||| ||| ||||| || |||| || Sbjct 304120 CTTACCCATAGT-TGGGGCAC-GCAAGAATAAATTCAAAGAGTGAGATTGGTCGATGTAA 304063 Query 80161 GCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTACGA 80220 |||| || || ||||| | ||| |||| |||||||| ||||||||| || || | Sbjct 304062 ATGGCACGGTCGGCTGCCATGTTAATGATTGTCTTTTGTGAAATTTCCCAAACAGTTTTA 304003 Query 80221 TACA 80224 |||| Sbjct 304002 TACA 303999 Score = 87.8 bits (96), Expect = 2e-12 Identities = 277/422 (66%), Gaps = 27/422 (6%) Strand=Plus/Minus Query 81313 TCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC---- 81368 |||| ||||| | ||| || || ||||||||||||| ||| | ||| | | || Sbjct 302889 TCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGGGCAAAGGCACCAGGT 302830 Query 81369 --CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATA 81426 |||| || |||| |||| || ||||||||||| ||| || ||||| | |||| Sbjct 302829 CTCTTGTTAC---CACCTTGGTCAACATAACGGGCAGTATTGTTGAAGACACGGATCATA 302773 Query 81427 GGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACC 81486 || || | || | || ||||| ||||| | || || || | || || | Sbjct 302772 GGAATTAACCCGTTAGAAGTCCCGTTTGTACCAGCAATGTAAGAGCCGGTTGCACGAATG 302713 Query 81487 TTGCTGATTGAAAGACCGATGCCACCTGACCACTTT--GAAATCTGAGCACACCGGTTCA 81544 ||| ||| ||||| || || || | || ||| |||||| |||||| |||| Sbjct 302712 TTGTGGATATGTAGACCAATACCTCC--AGCAGTTTTAGAAATCAAAGCACATTCCTTCA 302655 Query 81545 TGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACA 81604 || || ||||| || || ||| ||| | ||||| ||| ||||||||| |||| Sbjct 302654 AAGTATCGTAAATACCTTCAATGGAATCATCCTTCATTGCAACTAAGAAACAGGAGGACA 302595 Query 81605 TCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACG 81662 | ||||| ||| ||| || || ||||| | ||||| | || ||| | || || Sbjct 302594 TTTGAGG--CTTTGGAGTACCAGCGTTGAATAAAGTTGGAGAGGCATGAGTAAAGTA--- 302540 Query 81663 GTTT---GACATCAGGTCATAGGTTTCCTTGACGCG--TGGAATATCGTCACCGTGAATA 81717 ||| ||||| | || ||||||||| | | ||| ||| | |||||||||||| Sbjct 302539 TTTTAGAGACATTAAGTTATAGGTTTC--TAAAGCGGCCTCAATGTTTTCACCGTGAATA 302482 Query 81718 CC 81719 || Sbjct 302481 CC 302480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310228906880