Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001298625.1_202015-11- 04] 24 sequences; 11,734,173 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq12 167 5e-36 seq11 161 2e-34 seq5 149 1e-30 seq14 84.2 5e-11 >seq12 Length=1033978 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||||| ||| || ||||||||||||||||||| | || | ||| || || Sbjct 476379 ACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCGTCTTCC 476320 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || ||||||||||| | |||||||||| |||||||| ||||||||||| Sbjct 476319 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGA 476260 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | || || | || |||||||| |||| ||| ||||| || || || |||||| Sbjct 476259 ATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAACTTCAAGGGTAATAGTCTTA 476200 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || |||||||| ||||| || ||||| || Sbjct 476199 CCGGTTAAAGTCTTGACGAAAATTTGCATCTT 476168 Score = 118 bits (130), Expect = 2e-21 Identities = 130/173 (75%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| ||||| ||||| | | || | |||||||| | || || || ||||| Sbjct 67101 TCCTTTTGAATGTTATAGTCCGACAAAGTTCTACCATCCTCCAACTGCTTACCAGCAAAA 67160 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | ||||||||| |||||||| ||||||||||| ||||| | || ||| | Sbjct 67161 ATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTG 67220 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGT 283081 ||||| ||||| |||| ||||| || | || || |||||||| |||||||| Sbjct 67221 TCGATCGTGTCAGAAGACTCGACCTCTAAGGTTATGGTCTTACCGGTCAAAGT 67273 Score = 104 bits (114), Expect = 5e-17 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 |||||||| ||||||||||| ||||| | || ||| | ||||| ||||| || | ||| Sbjct 68179 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCGGAGGACTCG 68238 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || | ||| || |||||||| ||||||||||| ||||| |||||||| Sbjct 68239 ACCTCTAAAGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 68288 Score = 91.5 bits (100), Expect = 3e-13 Identities = 168/244 (69%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 316947 AATGAAGTCAACGATAGACGTGTTAGATTCGGATCCGTCGAGGTCATGCTCAACATATGC 317006 || |||||| | || ||| |||| ||| | | || || | ||||||||||| || | Sbjct 613568 AACGAAGTCTAAGACAGAAGTGTCAGAGTGAGTACCATCAATATCATGCTCAACGTAGAC 613509 Query 317007 AGTTTTCAGAATATCCTT-CGTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCA 317065 ||| | | | | | ||| || ||||| || || | ||||| || |||| || |||| Sbjct 613508 GGTTCT-ACATTCTTCTTGGGTTGGGAAACCATCAACTTGACCATTAGCAATAGCTCTCA 613450 Query 317066 TCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCA 317125 ||| || ||||| ||| ||| || || || || | |||||| | | | |||||| Sbjct 613449 TCAAAGTGGACTTACCACAACCGTTTGGACCACAGATACCATATCTTCTAGCTCTCTTCA 613390 Query 317126 GATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAAT 317185 | || |||| ||||||| | |||||| |||| || |||| |||||| ||||| | Sbjct 613389 ATCTCAATTGGGTCTTGTTCAACAAGATCTTAGCACCGTAAGCCAAAGAGAATTCACAGT 613330 Query 317186 CACA 317189 ||| Sbjct 613329 TACA 613326 >seq11 Length=632881 Score = 161 bits (178), Expect = 2e-34 Identities = 155/196 (79%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTT 282954 |||||| ||| ||| ||||| ||||||||||| | |||| || | || || || | || Sbjct 600571 ATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAG-GTTCTACCGTCTTCCAATT 600629 Query 282955 GTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCT 283014 | || || ||||||||||| | |||||||||| || ||||| || |||||||| |||| Sbjct 600630 GCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTCTTGAATCT 600689 Query 283015 TTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCG 283074 | | ||| || | || || ||||| |||| ||| ||||| |||||||| |||||||| | Sbjct 600690 TGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAGAGTGATGGTCTTACCAG 600749 Query 283075 TCAAAGTCTTAACGAA 283090 |||||||||||||||| Sbjct 600750 TCAAAGTCTTAACGAA 600765 >seq5 Length=401362 Score = 149 bits (164), Expect = 1e-30 Identities = 152/196 (78%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTT 282954 |||||| ||| ||| |||||||| |||||||||| |||| || | || || || | || Sbjct 47655 ATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAGACAAG-GTTCTACCGTCTTCCAATT 47597 Query 282955 GTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCT 283014 | || || |||||||| || | |||||||||| || ||||| ||||||||||| |||| Sbjct 47596 GCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGAATCT 47537 Query 283015 TTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCG 283074 ||| || || | || || ||||| |||| ||| ||||| | |||||| |||||||| | Sbjct 47536 TTGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAG 47477 Query 283075 TCAAAGTCTTAACGAA 283090 ||||||| || || || Sbjct 47476 TCAAAGTTTTGACAAA 47461 >seq14 Length=768019 Score = 84.2 bits (92), Expect = 5e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 317026 GTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCA 317085 || ||||| || || | ||||| || ||| || | ||| || || || || |||||| Sbjct 601856 GTGGGGAAGCCGTCAACTTGACCATTGGCAACCGAACGCATTAGAGTGGATTTCCCAGCA 601797 Query 317086 CCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTC 317145 ||||| || || || |||||||||| | ||| | |||| | | | || ||||| Sbjct 601796 CCATTAGGCCCACATAGACCATACCTTCTACCCCTTTTCAACCTTAGTTGAGTTTTGTTT 601737 Query 317146 AGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACA 317189 || | ||||| |||||||||||| ||| |||||||| | ||| Sbjct 601736 AGCAAGATCTTGGCACCATATGCCAAAGAAAACTCACAGTTACA 601693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738878127696