Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01-
13] 47 sequences; 11,649,856 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq35 98.7 8e-16
seq27 93.3 3e-14
seq37 89.7 4e-13
seq34 87.8 1e-12
>seq35
Length=393679
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
|| || | |||||| || |||| ||| || || || || ||||||||||| ||||| | |
Sbjct 68069 CCACCTCTTAGTCTTAGGACCAAGTGCAGAGTGGACTCCTTTTGAATGTTATAGTCCGAC 68128
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| ||| ||| ||| ||||| || || || ||| | || | ||||||||| || ||
Sbjct 68129 AAAGTTCTACCATCCTCCAACTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGA 68188
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278
| |||||||| || ||| | |||||| | | | |||||| | ||||
Sbjct 68189 ATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCAGAAGACTCGACC 68248
Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| | ||| ||| | || |||||||| || || || ||||| |||||
Sbjct 68249 TCTAAGGTTATGGTCTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 68295
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167
||||| | || | |||||| || || || ||||||||||| ||||| | || ||| ||
Sbjct 68534 AGTCTTAAAACTAAGTGAAGGGTAGACTCCTTTTGAATGTTATAGTCTGACAAAGTTCTA 68593
Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227
| ||| |||| ||| || || ||| | || ||||||||||| || || | ||||||
Sbjct 68594 CCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGGATACCTTCC 68653
Query 18228 TTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTG 18287
|| || ||| | |||||| | | | |||||| | |||| ||| | ||
Sbjct 68654 TTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGACTTCCAAAGTA 68713
Query 18288 ATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||| | || || |||||||| || || || ||||||||
Sbjct 68714 ATGGTCTTACCAGTCAATGTCTTGACGAAGATTTGCAT 68751
>seq27
Length=402821
Score = 93.3 bits (102), Expect = 3e-14
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 18120 ATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAAT 18179
|||| ||||| ||||| ||||| || |||||||| | || ||| ||| |||||||||
Sbjct 50166 ATGTAAAGTG--GATTCCTTTTGGATATTGTAGTCAGACAAGGTTCTACCGTCTTCCAAT 50109
Query 18180 TGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATT 18239
|| || || ||| |||| | ||||||||| || || | |||||||| || |||
Sbjct 50108 TGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGAATC 50049
Query 18240 TGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCG 18299
| | |||||| | ||| |||||| | || ||| | |||||| | || ||
Sbjct 50048 TTTGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCA 49989
Query 18300 GTCAATGTTTTTACAAAA 18317
||||| ||||| ||||||
Sbjct 49988 GTCAAAGTTTTGACAAAA 49971
>seq37
Length=384943
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | || || || ||||| ||||||||||| | || ||| | | ||||||
Sbjct 8917 ACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCGTCTTCC 8858
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| |||| | ||||||||| || || | |||||||| || |
Sbjct 8857 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGA 8798
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| |||||| | || ||||| ||| || | ||
Sbjct 8797 ATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAACTTCAAGGGTAATAGTCTTA 8738
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
||||| || || || || ||||||||||| ||
Sbjct 8737 CCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8706
>seq34
Length=182383
Score = 87.8 bits (96), Expect = 1e-12
Identities = 75/92 (82%), Gaps = 2/92 (2%)
Strand=Plus/Plus
Query 18120 ATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAAT 18179
|||| ||||| ||||| ||||||||||||||||||| || ||| ||| |||||||||
Sbjct 149935 ATGTAAAGTG--GATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTACCGTCTTCCAAT 149992
Query 18180 TGTTTGCCCGCATAGATAAGTCTTTGTTGATC 18211
|| || || ||| |||| | ||||||||| ||
Sbjct 149993 TGCTTACCAGCAAAGATCAATCTTTGTTGGTC 150024
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343782707015
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |