Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01- 13] 47 sequences; 11,649,856 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq12 194 2e-44 seq27 123 2e-23 >seq12 Length=580751 Score = 194 bits (214), Expect = 2e-44 Identities = 516/781 (66%), Gaps = 13/781 (2%) Strand=Plus/Minus Query 36796 GTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGC 36855 ||||||| |||| | || || | || |||||||| ||||||||| || || ||||| Sbjct 307113 GTGAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAAATAATACATACCGGTCTTTAGA 307054 Query 36856 CCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATA 36915 ||| |||| ||||| ||||||||||| || || || | || || | | Sbjct 307053 CCCTTCTTCCAGCCGTAGAAATGCATACTTGTTAGCTTACCCATAGTTGGGGCACGCAAG 306994 Query 36916 TATATTGTCATTGATTGACTTTGATCTAT--AAACGCACCTCTGTCGGCTGCCATTTCTA 36973 ||| ||| || ||| ||| || || ||| | | | |||||||||||| | | Sbjct 306993 AATAAATTCAAAGAGTGAGATTGGTCGATGTAAATGG--CACGGTCGGCTGCCATGTTAA 306936 Query 36974 AAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTA 37033 || ||||| || || |||||||| |||||||| | | ||| | | | ||| | Sbjct 306935 TGATTGTCTTTTGTGAAATTTCCCAAACAGTTTTATACAAATCTTTCAATTCTTGTGGCA 306876 Query 37034 AATCT---AAATGTTGAATAGAACCATTATGTAACACAATTGTATT-CTTTATGTCATTA 37089 || | ||| |||||| |||||||| ||| | | |||| ||| || ||| | Sbjct 306875 CATTTGGTAAACCTTGAATGGAACCATTTTGTGTGATTAGA-TATTGCTTCATACCATCA 306817 Query 37090 TTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCT 37149 | ||| ||| | | | || | ||| | || |||||| || || ||||| || Sbjct 306816 TCCCAAATACCCAAATCGACCAAATCACGCAACAAGTATGGATTGACGACTTGAAATTCA 306757 Query 37150 CCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTA 37209 ||||||| || | | | ||| || ||| |||| |||||| | |||| || | | Sbjct 306756 CCAGATAGGACACGACGAGAATACATGTTGGAAGTAACTGGTTCGAAACACTCGTTGTAA 306697 Query 37210 CTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTAT--TAGAAGGCTATTTCTCA 37267 | ||| || |||||||| |||||||||||||| ||||| || | ||| | |||| | Sbjct 306696 CCTAAGATCTGAGATGTGGATGCAGTAGGCATAGGTGCCATGGTCAAAGAGT--TTCTAA 306639 Query 37268 ATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCT 37327 ||||| | || | ||| | || | ||||||||| | | | ||| || | Sbjct 306638 TACCATGCTCCATGATGTTATTTCTCAGAGTGTCCCAATCCCACATACCGTATGGTTTTT 306579 Query 37328 TTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCAT 37387 |||||| || |||| || ||||||| | || || || | ||| | || || | Sbjct 306578 GGTCCCACATGTCGAATTGAAGTATACCTTGAGAAGCCGGGGAGCCTTTAAAGGTTTCGT 306519 Query 37388 AAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTT 37447 | || || | ||| ||||| ||| ||| || ||| | | ||||| || || |||| Sbjct 306518 ATGGGCCATCTCTTTGAGCTAATTCACAAGAAGCTTCCATGGAGGCATGGTAGATAGTTT 306459 Query 37448 CGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATA 37507 |||| ||||| ||||||| || ||||||||| ||||||| | | ||| || | Sbjct 306458 CGAAGATTTGAATATTTAGTAAGCGTGCTTCTTCTGAGTCGAATGGCAAACGCAACAACA 306399 Query 37508 TAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATC 37567 | || ||||||||||| || ||||| | | | || || |||||| || ||||||||| Sbjct 306398 TGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATCGGCCTATGTCTCATATTAGATC 306339 Query 37568 T 37568 | Sbjct 306338 T 306338 Score = 165 bits (182), Expect = 8e-36 Identities = 416/629 (66%), Gaps = 10/629 (2%) Strand=Plus/Minus Query 38010 TTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGT 38069 || ||| || || | ||| || | ||| || ||||||| || | ||||||||| | | Sbjct 305881 TTCTTCGACACGCTTCATGAAAAGATCTGGAACCCATAGAGCTGGGAATAAATCTCTTGC 305822 Query 38070 TCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTG 38129 | |||||| || || ||||||||| | | | || ||||| ||||||||||| Sbjct 305821 ACGGATTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAGCGTG 305762 Query 38130 CCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATA 38189 |||||| || | ||| | | | || || ||||| || | ||| || || | || ||| Sbjct 305761 CCATGGCTCCAAATATAGGGCAAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAACATA 305702 Query 38190 TCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTAT 38249 | | || || || | | | | |||||| | || || ||||| | |||||| | Sbjct 305701 ACGGGCAGTATTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTTGT 305642 Query 38250 ACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGC 38309 ||| | || |||| || | || || || || || | || || || || || Sbjct 305641 ACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGGATATGTAGACCAATACCTCCAGC 305582 Query 38310 ATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATC 38369 | ||| || || ||||| |||| || || ||||| | |||||||| || ||||| Sbjct 305581 AGTTTTAGAAATCAAAGCACATTCCTTCAAAGTATCGTAAATACCTTCAATGGAATCATC 305522 Query 38370 CTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAA 38429 ||| |||| | || ||||| |||||||||||| |||||| || ||||| ||||| Sbjct 305521 CTTCATTGCAACTAAGAAACAGGAGGACATTTGAGGCTTTGGAGTACCAGCGTTGAATAA 305462 Query 38430 TGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATC 38489 || ||||| ||||| | || ||||| |||| | ||||| ||||||| | | Sbjct 305461 AGTTGGAGAGGCATGAGTAAAGTATTTTAGAGACATTAAGTTATAGGTTTCTAAAGCGGC 305402 Query 38490 ATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549 || || | | |||||||||||||| | || ||||| | | || ||||| | ||| Sbjct 305401 CTCAATGTTTTCACCGTGAATACCTAGGGCGACTCTCATGATTAAGTGCTGTGGACGTTC 305342 Query 38550 TATTATTTTA----TTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAA 38605 | || | | ||||| |||||| ||| ||| || ||||| | || | Sbjct 305341 AGCAACTTGACCGTTGATTCTCAATAAGTAAGAACG----TTCCAAAGTTTTGAAACCGA 305286 Query 38606 AATAACTATA-TGAATAATCTCTATCGTA 38633 | |||||||| |||| | ||||| || || Sbjct 305285 AGTAACTATACTGAA-AGTCTCTGTCATA 305258 >seq27 Length=402821 Score = 123 bits (136), Expect = 2e-23 Identities = 1109/1779 (62%), Gaps = 68/1779 (4%) Strand=Plus/Plus Query 36814 GATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAA 36873 || || | || |||||||| || ||||| || || || | ||| |||| ||||| Sbjct 214261 GAAGCGGCTTGTGTTCTCAAGTAGTACATACCCGTCTTCAAACCCTTCTTCCAACCGTAG 214320 Query 36874 AAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATC-TATATATATTGTCATTGATTG 36932 ||||||||||| || | |||| | || | | | || || | | ||| || || Sbjct 214321 AAATGCATACTTGTAA-TTTTACCCATTGATGGTGATTGTAGGAACAAATTCAAGGAGTG 214379 Query 36933 ACTTTGATCTAT--AAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGAT 36990 |||||| || ||| | | | | | || ||||| | | |||| |||||||| Sbjct 214380 GGATTGATCAATGTAAATGGAACGAT--CAGCAGCCATGTTGATAATAGTCTTTTGAGAG 214437 Query 36991 ATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT---AAATGTTGA 37047 || ||||| || |||||||||| | ||| | || | || | | | |||| || | Sbjct 214438 ATTTCCCAGACAGTTTTATATAGATCTTTCAAATCTTGAGGAACGTTTGGTAAATCTTTA 214497 Query 37048 ATAGAACCATTATG--TAA-CACA-ATTGTATTCTTTATGTCATTATTCCACATATTTCT 37103 || |||||||| || ||| || | ||||| ||| | | |||| | || || | Sbjct 214498 ATGGAACCATTTTGAGTAATCAAATATTGT-TTCATACTATCAT-----CCCAAATGCCC 214551 Query 37104 ACTT--ATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACT 37161 | | | || || | | || || |||||| || || || || || |||||||| || Sbjct 214552 AGATCGACTAAATCACGTAGTAAGTATGGATTGACGACTTGGAATTCACCAGATAAGACA 214611 Query 37162 CTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGA 37221 | | | || || || ||| |||||| | ||||||| | | | ||||| Sbjct 214612 CGACGAGAGTACATGTTTGAAGTGACTGGTTCGAAACACTCATTGTACCCAAGAATTTGG 214671 Query 37222 GATGTAGATGCAGTAGGCATTGGTGCTAT--TAGAAGGCTATTTCTCAATCCATGTGTAT 37279 ||||| || || || |||||||| || || | ||| | |||| || |||||| | Sbjct 214672 GATGTTGAAGCGGTTGGCATTGGGGCCATGGTTAAAGAGT--TTCTTAACCCATGTTTCA 214729 Query 37280 TAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTT--CTTTAACCACAT 37337 ||| ||| || | | ||||||||| | | ||| || | || |||||| Sbjct 214730 CAATGTCCTTCTTCAAAGTGTCCCAATCCCACATGCCAAATGGCTTAGCATT--CCACAT 214787 Query 37338 ATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTA 37397 || | |||| |||||| ||| || ||||| | | | | || ||| || | Sbjct 214788 GTCGAACTGTAAAATACCCTTAGAGGCAGGAGAGCCTTCAAAAGTGGAATATTTACCTTC 214847 Query 37398 AATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTG 37457 ||| ||||| || ||| || ||| || | |||| || || |||||||||||||| Sbjct 214848 CTTTTGAGCTAACTCACAAGAAGCTTCAAGGGTAGCATGGTAAATAGTTTCGAAAATTTG 214907 Query 37458 TATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCA--ATAATATAAACACA 37515 | |||| | ||||| |||| ||| | || |||| | | || || |||||| | Sbjct 214908 TTTATTAAGTATTTGAGCTTTTTCACATTCAAATGGTAAACGCAGCATCATATAA--GTA 214965 Query 37516 TCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGA---TCTAGAC 37572 || |||||||| ||||| || | | || |||||||||||| | ||||| ||||| | Sbjct 214966 TCGGCCAAACCTTGAACCCCCAGGGCAATAGGTCTATGTTTCATGTTAGAGTTTCTAGCC 215025 Query 37573 GATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATT 37632 ||| |||||||||||| || || || | | |||| | || | | | | | Sbjct 215026 ---TCTGGCACTGGATAATAGTTACGGTCGATGACTCTATTCAAGTTATGAGTGATGACT 215082 Query 37633 TTCGTAAT-TATTCTCAACTTGTCGAACAT-AAATACGTTATTATTAACAAATT-----T 37685 || | ||| | | | ||||| | ||| | | || || ||| || || Sbjct 215083 TTAGCAATGTCATGTAAACTT-TGGAAATTGTAGGTCGCCGTT-TTACCATCTTCCGAAG 215140 Query 37686 ACTCAACGA-------------AATAGATCCTAGATTACATACAGCAACTTCATCTTCGT 37732 |||||||| ||| || ||| |||||| |||||| ||||||| | Sbjct 215141 TCTCAACGAATGCTGGTAGAGCAATGGAAGCTAAATTACAAACAGCAGTTTCATCTGGGG 215200 Query 37733 TACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTT 37792 | | | | | || || ||| | || |||| | || || |||| || || Sbjct 215201 AAGAATACTCGACGATTTCGCAACACAAGTTTGACGATTTGATGGTACCCAGGTTTTGTT 215260 Query 37793 GATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTT 37852 | |||| ||| | ||||| | ||| ||||| | || | || || || |||| ||| Sbjct 215261 GGTTGGTCTTTCTGTTACAGGCATCCTTATAAACCATGAAGGGTGTACCGGTTTCTGTTT 215320 Query 37853 GAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTTA--Attttttt 37910 | || | | || | | ||||| || || || ||| | |||| | || Sbjct 215321 GTGCTTGCAAGATGGCGTACCATACCTTTTGAGCCTT---GATGGTTTTACCACGACCTT 215377 Query 37911 CTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCC 37970 | | ||||||| |||||| | | || || | ||||| || ||| || || Sbjct 215378 C--TCTTTCGTAACGGGTATATAGCTCTTCGAATTCTTCACCCCAAACGTCGTCCAAACC 215435 Query 37971 TGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAA 38030 ||| | | ||| | | || | ||| | |||| | ||| || || | ||| || Sbjct 215436 TGGGGCAGCACTTGGTGAGAATAAGGTCCAGGCCCCATCCTCTTCGACACGCTTCATGAA 215495 Query 38031 TAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTAC 38090 | ||| || | ||||| |||| || |||||| | | | | |||||| || || Sbjct 215496 AAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCTTCCTTACCATG 215555 Query 38091 ATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGA 38150 | ||||||| | | ||| ||||| || || || |||||||| || | ||| | Sbjct 215556 AGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAAAAGGGC 215615 Query 38151 CATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATAT 38210 | || || ||||| || | ||| || || | | || | | ||||| || | | Sbjct 215616 AAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGTAACGTGCAGTGTTGTTGAAGAC 215675 Query 38211 TCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTT 38270 | | ||| || | | || || || | ||||| |||| | ||||||| || | Sbjct 215676 ACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGT 215735 Query 38271 AGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCA 38330 | || ||||| | || | || | ||||||||| || || || | || || Sbjct 215736 GGAACGAATATTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCACA 215795 Query 38331 TTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACA 38390 | ||| || || || | |||||||| || ||| ||||| || | | | ||||| Sbjct 215796 CTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGGCAATCAGGAAACA 215855 Query 38391 ACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAA 38450 | |||||||||||| ||| || ||||| ||||||| ||| || || || || |||| Sbjct 215856 AGAAGACATTTGAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGGAAGCGTGGGTGAA 215915 Query 38451 CCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAAT 38510 || | ||||| | || || || | | || || ||||| | ||||||||| Sbjct 215916 GTATCTCAACGACATCAAGTTGTAAGTCTTCAGCACGGACTCGATATCGCTGCCGTGAAT 215975 Query 38511 ACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549 |||||| | || | ||| | || |||||| || | ||| Sbjct 215976 ACCTAGGGCCACACGCATGACCAAATGTTGGGGACGTTC 216014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524524741680