Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01- 13] 47 sequences; 11,649,856 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq35 132 3e-26 seq34 132 3e-26 seq37 131 1e-25 seq27 125 5e-24 >seq35 Length=393679 Score = 132 bits (146), Expect = 3e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||| ||| || || || ||||| || || |||||||| ||||||||||| Sbjct 68297 CCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCAGAC 68356 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | ||||| | ||| || || || | ||||| | |||||||| ||| Sbjct 68357 AGCGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGA 68416 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || || ||||| || || || ||||||||| | || || || || | || || Sbjct 68417 ATGCCCTCTTTATCCTGTATCTTACTCTTTACATTGTCAATCGTGTCAGAAGACTCAACT 68476 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || ||||| ||||| ||||| || |||||||| |||||||| |||||| Sbjct 68477 TCCAAGGTTATGGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCATA 68524 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||| |||||||||||| |||||||| || || ||||| ||||| || || Sbjct 68525 CCACCTCTCAGTCTTAAAACTAAGTGAAGGGTAGACTCCTTTTGAATGTTATAGTCTGAC 68584 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | |||| | || || | ||| || ||||| | |||| | ||||||||| || Sbjct 68585 AAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGG 68644 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| ||| ||| ||| || | || ||||| || | || || Sbjct 68645 ATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGACT 68704 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || |||||||| ||||| |||| || || || || ||||||||| Sbjct 68705 TCCAAAGTAATGGTCTTACCAGTCAATGTCTTGACGAAGATTTGCATA 68752 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| | |||||| || || || || || || || ||||| ||||||||||| Sbjct 68753 CCACCTCTTAGTCTTAAGACCAAGTGCAGAGTAGACTCCTTTTGGATGTTGTAATCAGAC 68812 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| ||||||| | ||||| ||||| | ||||| | ||||| || ||| Sbjct 68813 AGCGTTCTGCCGTCTTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCCGGAGGA 68872 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| ||| ||| ||| || | || || || || | || || Sbjct 68873 ATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCAGAAGACTCGACC 68932 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||||||| ||||| ||||| |||| ||| || || ||||| |||||| Sbjct 68933 TCTAAGGTTATGGTCTTACCGGTCAAAGTCTTGACGAAAATCTGCATA 68980 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||| ||| || || || || || || || || ||||| ||||||||||| Sbjct 68981 CCACCTCTCAGTCTCAAGACCAAGTGCAGAGTAGACTCCTTTTGGATGTTGTAATCAGAC 69040 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| ||||||| | ||||| ||||| | ||||| | ||||| || ||| Sbjct 69041 AGCGTTCTGCCGTCTTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCCGGAGGA 69100 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| ||| ||| ||| || | || || || ||| || || Sbjct 69101 ATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCGGAGGACTCGACC 69160 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||||| |||||||| ||||| |||| ||| || || ||||| |||||| Sbjct 69161 TCTAAAGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCATA 69208 >seq34 Length=182383 Score = 132 bits (146), Expect = 3e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| || |||||||| | ||||| || ||||| |||||||| ||| Sbjct 149912 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 149971 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| ||||||| ||||| || ||||| | ||||| | ||||||||| ||| Sbjct 149972 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 150031 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| ||| ||| || ||| | || ||||| || | ||| || Sbjct 150032 ATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACT 150091 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAA 15354 |||| || ||||| ||||| |||| ||| || || || Sbjct 150092 TCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 150129 >seq37 Length=384943 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| || || || || | ||||| || ||||| |||||||| || Sbjct 8935 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 8876 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | |||| ||||||| ||||| || ||||| | ||||| | ||||||||| |||| Sbjct 8875 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8816 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| ||| || ||| ||| | || || || || | ||| || Sbjct 8815 ATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAACT 8756 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 || | |||||| || ||||| || | ||| || || ||||||||||| || Sbjct 8755 TCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8706 >seq27 Length=402821 Score = 125 bits (138), Expect = 5e-24 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| ||||||||||| | ||||| || ||||| || ||||| || Sbjct 50189 CCACCTCTCAATCTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAGAC 50130 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| ||||||| ||||| || ||||| | || || | ||||||||| || Sbjct 50129 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGG 50070 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| ||| || ||| ||| | || ||||| || | ||| || Sbjct 50069 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 50010 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15355 || || || ||||| ||||| |||| |||||| |||||| Sbjct 50009 TCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAAA 49971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362178992539227