Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01-
13] 47 sequences; 11,649,856 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq35 132 3e-26
seq34 132 3e-26
seq37 131 1e-25
seq27 125 5e-24
>seq35
Length=393679
Score = 132 bits (146), Expect = 3e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||| ||| || || || ||||| || || |||||||| |||||||||||
Sbjct 68297 CCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCAGAC 68356
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| |||| | ||||| | ||| || || || | ||||| | |||||||| |||
Sbjct 68357 AGCGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGA 68416
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| || ||||| || || || ||||||||| | || || || || | || ||
Sbjct 68417 ATGCCCTCTTTATCCTGTATCTTACTCTTTACATTGTCAATCGTGTCAGAAGACTCAACT 68476
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| ||||| ||||| ||||| || |||||||| |||||||| ||||||
Sbjct 68477 TCCAAGGTTATGGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCATA 68524
Score = 118 bits (130), Expect = 8e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||| |||||||||||| |||||||| || || ||||| ||||| || ||
Sbjct 68525 CCACCTCTCAGTCTTAAAACTAAGTGAAGGGTAGACTCCTTTTGAATGTTATAGTCTGAC 68584
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| | |||| | || || | ||| || ||||| | |||| | ||||||||| ||
Sbjct 68585 AAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGG 68644
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| ||| ||| ||| || | || ||||| || | || ||
Sbjct 68645 ATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGACT 68704
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| || |||||||| ||||| |||| || || || || |||||||||
Sbjct 68705 TCCAAAGTAATGGTCTTACCAGTCAATGTCTTGACGAAGATTTGCATA 68752
Score = 118 bits (130), Expect = 8e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||| | |||||| || || || || || || || ||||| |||||||||||
Sbjct 68753 CCACCTCTTAGTCTTAAGACCAAGTGCAGAGTAGACTCCTTTTGGATGTTGTAATCAGAC 68812
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| |||| ||||||| | ||||| ||||| | ||||| | ||||| || |||
Sbjct 68813 AGCGTTCTGCCGTCTTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCCGGAGGA 68872
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| ||| ||| ||| || | || || || || | || ||
Sbjct 68873 ATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCAGAAGACTCGACC 68932
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|||||||| ||||| ||||| |||| ||| || || ||||| ||||||
Sbjct 68933 TCTAAGGTTATGGTCTTACCGGTCAAAGTCTTGACGAAAATCTGCATA 68980
Score = 118 bits (130), Expect = 8e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||| ||| || || || || || || || || ||||| |||||||||||
Sbjct 68981 CCACCTCTCAGTCTCAAGACCAAGTGCAGAGTAGACTCCTTTTGGATGTTGTAATCAGAC 69040
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| |||| ||||||| | ||||| ||||| | ||||| | ||||| || |||
Sbjct 69041 AGCGTTCTGCCGTCTTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCCGGAGGA 69100
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| ||| ||| ||| || | || || || ||| || ||
Sbjct 69101 ATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCGGAGGACTCGACC 69160
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
||||| |||||||| ||||| |||| ||| || || ||||| ||||||
Sbjct 69161 TCTAAAGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCATA 69208
>seq34
Length=182383
Score = 132 bits (146), Expect = 3e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| || |||||||| | ||||| || ||||| |||||||| |||
Sbjct 149912 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 149971
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| |||| ||||||| ||||| || ||||| | ||||| | ||||||||| |||
Sbjct 149972 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 150031
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||||||||| ||| ||| || ||| | || ||||| || | ||| ||
Sbjct 150032 ATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACT 150091
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAA 15354
|||| || ||||| ||||| |||| ||| || || ||
Sbjct 150092 TCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 150129
>seq37
Length=384943
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| || || || || | ||||| || ||||| |||||||| ||
Sbjct 8935 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 8876
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| | |||| ||||||| ||||| || ||||| | ||||| | ||||||||| ||||
Sbjct 8875 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8816
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| ||| || ||| ||| | || || || || | ||| ||
Sbjct 8815 ATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAACT 8756
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366
|| | |||||| || ||||| || | ||| || || ||||||||||| ||
Sbjct 8755 TCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8706
>seq27
Length=402821
Score = 125 bits (138), Expect = 5e-24
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| ||||||||||| | ||||| || ||||| || ||||| ||
Sbjct 50189 CCACCTCTCAATCTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAGAC 50130
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| |||| ||||||| ||||| || ||||| | || || | ||||||||| ||
Sbjct 50129 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGG 50070
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| ||| || ||| ||| | || ||||| || | ||| ||
Sbjct 50069 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 50010
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15355
|| || || ||||| ||||| |||| |||||| ||||||
Sbjct 50009 TCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAAA 49971
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362178992539227
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |