Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01- 13] 47 sequences; 11,649,856 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq29 107 2e-18 >seq29 Length=397901 Score = 107 bits (118), Expect = 2e-18 Identities = 534/837 (64%), Gaps = 35/837 (4%) Strand=Plus/Minus Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919 ||||| || ||| ||||| ||||| || ||||| || || || | || ||||| ||| Sbjct 366429 TTTTGGTAGTCGGAGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCCAAGGAAATGTTT 366370 Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAA-TAGTATTTTTTACACCCTAATTCTAGTAA 12978 ||||| |||||||| || || | ||| | ||||| || || || || | | || Sbjct 366369 TCCATGAAATCGAAGGGGTTGT-CGACCTTGTAGTACTTCTTGTTACCGAAGGCGACCAA 366311 Query 12979 CAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAA 13038 || |||||| || || ||||| | |||||| ||||| || || ||||| |||| || Sbjct 366310 CAGTCTGTCTGCGACGAACTCGACGTACTGGTTCATCAAGTCGGCATTCATACCTAGCAA 366251 Query 13039 TTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTAT 13098 || |||| || ||| || | ||| ||| || || || || ||| | || || Sbjct 366250 GGCGACTGGCAAGGCGTCTAGGAAGTATCTTTGTTCGATCTCGACGGCCTCGGTGACGAT 366191 Query 13099 GTCTCTTATTACGTTCTCTAATGGAGGATT--TGAT-AGATGCTTAAACATCATACATGC 13155 | ||| ||| | || || || | | | ||| |||| || ||| || Sbjct 366190 TT-TCTCG--ACGATGGCTGGGTCCGGCTTGTTCTTCAAATGGGCGAACAACAAACAGGC 366134 Query 13156 AAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGG 13215 ||| || |||||| ||||| ||||| | || | |||||| || || || | || || Sbjct 366133 AAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAACCCGGG 366074 Query 13216 CATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCC 13275 ||| | |||| || || | ||| || || | || || || || || || || | || Sbjct 366073 CATCATACCTCTCTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAGAAGAAAACACC 366014 Query 13276 TTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCT-ATCC 13334 ||| | | || || || | | |||||||| || | | | ||| |||| Sbjct 366013 TTCGATGGAGGCGAAGGCGACTAGTCTTTCACCGAACAG-CGCGTCTGCGTCTTGGATCC 365955 Query 13335 ACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAG--TTC----ATATTTTCTATTGCGT 13388 | | |||||| | || || | |||| ||| || | || || |||| Sbjct 365954 ATCTAAGGGCCCATTCGGCCTTCT------CGCAAATTTCTGGGATGGTGTCGATGGCGT 365901 Query 13389 TAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACA 13448 | || || | | ||||||| || || || ||||| ||||| ||| || Sbjct 365900 TGAACAAGAATTCACTTTCCTTTGGATCCTTGATGTAGGTATCGATCAACAAGGAGTAGG 365841 Query 13449 TTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATA 13508 |||| |||||||| ||||| || || ||||||||||| || |||| | || || | | Sbjct 365840 TTTCGGAATGAATGTTTTCGATAGCGATTTGGAAACCGTAGAAACTCTTGGCTTCCGGGA 365781 Query 13509 CCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAG 13568 ||| || |||| | | || | || | ||||||||||| || || ||||| || | Sbjct 365780 TCTGGACCTCGGTGGAGAAATTCTCGACCAAGTTTTCGTTGACAATACCGTCGGAGGCGG 365721 Query 13569 CaaaaaaaGCAAGTA----TGTGCTTAATAAAtttt--ttttCGTT--TTCTGACAACTT 13620 | || || ||||| | || | | || || ||| |||||||| ||||| || Sbjct 365720 CGAAGAAGGCAAGGACTCTTGAGATGAAGAACCTTTCGTTTTCGTTCATTCTG-----TT 365666 Query 13621 TAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGC 13677 ||| || | | ||| || || ||||| | ||||| | ||||| ||||| || Sbjct 365665 GTTCCAGTCATGGATATCCTTGGACAAATCGATTTCCTCGGCAGTCCAGAAAGAGGC 365609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982153127894