Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01-
13] 47 sequences; 11,649,856 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq29 107 2e-18
>seq29
Length=397901
Score = 107 bits (118), Expect = 2e-18
Identities = 534/837 (64%), Gaps = 35/837 (4%)
Strand=Plus/Minus
Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919
||||| || ||| ||||| ||||| || ||||| || || || | || ||||| |||
Sbjct 366429 TTTTGGTAGTCGGAGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCCAAGGAAATGTTT 366370
Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAA-TAGTATTTTTTACACCCTAATTCTAGTAA 12978
||||| |||||||| || || | ||| | ||||| || || || || | | ||
Sbjct 366369 TCCATGAAATCGAAGGGGTTGT-CGACCTTGTAGTACTTCTTGTTACCGAAGGCGACCAA 366311
Query 12979 CAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAA 13038
|| |||||| || || ||||| | |||||| ||||| || || ||||| |||| ||
Sbjct 366310 CAGTCTGTCTGCGACGAACTCGACGTACTGGTTCATCAAGTCGGCATTCATACCTAGCAA 366251
Query 13039 TTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTAT 13098
|| |||| || ||| || | ||| ||| || || || || ||| | || ||
Sbjct 366250 GGCGACTGGCAAGGCGTCTAGGAAGTATCTTTGTTCGATCTCGACGGCCTCGGTGACGAT 366191
Query 13099 GTCTCTTATTACGTTCTCTAATGGAGGATT--TGAT-AGATGCTTAAACATCATACATGC 13155
| ||| ||| | || || || | | | ||| |||| || ||| ||
Sbjct 366190 TT-TCTCG--ACGATGGCTGGGTCCGGCTTGTTCTTCAAATGGGCGAACAACAAACAGGC 366134
Query 13156 AAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGG 13215
||| || |||||| ||||| ||||| | || | |||||| || || || | || ||
Sbjct 366133 AAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAACCCGGG 366074
Query 13216 CATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCC 13275
||| | |||| || || | ||| || || | || || || || || || || | ||
Sbjct 366073 CATCATACCTCTCTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAGAAGAAAACACC 366014
Query 13276 TTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCT-ATCC 13334
||| | | || || || | | |||||||| || | | | ||| ||||
Sbjct 366013 TTCGATGGAGGCGAAGGCGACTAGTCTTTCACCGAACAG-CGCGTCTGCGTCTTGGATCC 365955
Query 13335 ACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAG--TTC----ATATTTTCTATTGCGT 13388
| | |||||| | || || | |||| ||| || | || || ||||
Sbjct 365954 ATCTAAGGGCCCATTCGGCCTTCT------CGCAAATTTCTGGGATGGTGTCGATGGCGT 365901
Query 13389 TAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACA 13448
| || || | | ||||||| || || || ||||| ||||| ||| ||
Sbjct 365900 TGAACAAGAATTCACTTTCCTTTGGATCCTTGATGTAGGTATCGATCAACAAGGAGTAGG 365841
Query 13449 TTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATA 13508
|||| |||||||| ||||| || || ||||||||||| || |||| | || || | |
Sbjct 365840 TTTCGGAATGAATGTTTTCGATAGCGATTTGGAAACCGTAGAAACTCTTGGCTTCCGGGA 365781
Query 13509 CCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAG 13568
||| || |||| | | || | || | ||||||||||| || || ||||| || |
Sbjct 365780 TCTGGACCTCGGTGGAGAAATTCTCGACCAAGTTTTCGTTGACAATACCGTCGGAGGCGG 365721
Query 13569 CaaaaaaaGCAAGTA----TGTGCTTAATAAAtttt--ttttCGTT--TTCTGACAACTT 13620
| || || ||||| | || | | || || ||| |||||||| ||||| ||
Sbjct 365720 CGAAGAAGGCAAGGACTCTTGAGATGAAGAACCTTTCGTTTTCGTTCATTCTG-----TT 365666
Query 13621 TAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGC 13677
||| || | | ||| || || ||||| | ||||| | ||||| ||||| ||
Sbjct 365665 GTTCCAGTCATGGATATCCTTGGACAAATCGATTTCCTCGGCAGTCCAGAAAGAGGC 365609
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430982153127894
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |