Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01- 13] 47 sequences; 11,649,856 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq23 104 3e-17 seq25 96.9 4e-15 seq11 87.8 2e-12 >seq23 Length=177966 Score = 104 bits (114), Expect = 3e-17 Identities = 364/567 (64%), Gaps = 35/567 (6%) Strand=Plus/Plus Query 6699 TGGATGAGGATTATAATCTAACAATTCAAAATCTTCAAATTTAAAATCACATAAATTATC 6758 ||| |||||||| || ||| | ||| |||||||| || ||||| ||| | |||| || Sbjct 165367 TGGGTGAGGATTGTAGTCTTCAATTTCGAAATCTTCTAACTTAAAGTCA--TCAATT-TC 165423 Query 6759 AGACttttt--ttttAATATTACAACAGGTGAAGGTTTTATTGATCGAGTTAA--TTGTT 6814 | | | ||||||| || | || ||| | | | | |||| | || ||||| Sbjct 165424 TGTAATGTCCCTTTTAATCTTTAATTTGGGGAATGGTCT-TGGATCTCTTGAAATTTGTT 165482 Query 6815 CTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATT 6874 | || | || | |||||||| ||| | ||| ||||| || | |||||||| || | Sbjct 165483 CATTCAAGGCATCAATATGATCCTTATACACATGTGCATCCCCCAAAGTATGAATGAACT 165542 Query 6875 CACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTA 6934 |||| |||| ||||||||| ||| ||| || | || | || ||||| || || | Sbjct 165543 CACCCGGTTCCATATCAACGACTTTAGCTATCATTCTAGTCAGTAGCGCATATGAGGCGA 165602 Query 6935 CATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATA--ACA------------ 6980 |||||| || ||||| | |||||||| || | ||| || ||| Sbjct 165603 TATTAAATGGCACACCGAGCCCCATATCACAGGAACGTTGGTACAACAAGCACGAAAGGC 165662 Query 6981 ----TTGACAAGATAAAATATTGTCTATAG---------CATAAAATTGACACAATACAT 7027 || || | | | | ||| | | |||||||||| | || | | Sbjct 165663 GAGGTTTACCACTTCCACTTCCCTCTTTGGGGAAACTGACATAAAATTGTGAAAAAATGT 165722 Query 7028 GACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAATAC 7087 | ||||| ||||| | || || | ||| | || |||||||| |||| | || | Sbjct 165723 GGCATGGCGGTAAGGCCATCTTGTCAAAATCTGCAGGGTTCCAAGCGCTCATGATGATTC 165782 Query 7088 GTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATACCCT 7147 |||||||| || ||||| |||||||| ||||| | | ||||| ||||| | Sbjct 165783 TTCTATCATAAGGGTTTGTCTTTAATTTGTGTATAACCTGCTTCAGCTGATCGATACCTT 165842 Query 7148 GACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACC 7207 | || ||| | | | || | | || || || ||||||||||||||||| |||| Sbjct 165843 GTCCGGTATAGTCATCGTCGCAGGTCTTGTATTTGGCACCAAAATGTCTCCATTGGAACC 165902 Query 7208 CATAAATAGGACCTAAATCACCTTCTT 7234 |||||| |||||| | ||| ||| ||| Sbjct 165903 CATAAACAGGACCCAGATCCCCTACTT 165929 >seq25 Length=228797 Score = 96.9 bits (106), Expect = 4e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 19358 CCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGATT 19417 ||| |||| ||||| || || |||||| | || |||||| || || |||||| | Sbjct 18257 CCTCAAATCGGTGACAAATTCGCTTCTCGTCATGGTCAAAAGGGTACTATTGGTATCACA 18198 Query 19418 TATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTAAC 19477 |||||| |||||||||||| ||||| ||| ||||| || || ||| | ||||| || Sbjct 18197 TATCGTAGAGAAGATATGCCATTTACAGCAGAAGGTATCGTTCCAGATTTAATTATCAAT 18138 Query 19478 CCACATGCTTTTCCAAGTCGAATGAC 19503 || |||||| ||||| ||| ||||| Sbjct 18137 CCTCATGCTATTCCATCTCGTATGAC 18112 >seq11 Length=608272 Score = 87.8 bits (96), Expect = 2e-12 Identities = 252/385 (65%), Gaps = 16/385 (4%) Strand=Plus/Minus Query 164605 AAAATTGTTAATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTT 164664 || |||||||| ||||||||| | || | || ||||| ||| ||||||| || | Sbjct 193894 AAGATTGTTAACGGTCCTGAAGTTTTAAGTAAGTATGTTGGTTCCTCAGAAGAAAACATC 193835 Query 164665 AGAAAGTTGTTTCAGGAGGCTGAAGAAGAACAAAAGA--AAGCAGGTTTAGCTAGTAAAT 164722 | || || || | || || |||| |||| | ||| ||| || | | | | Sbjct 193834 CGTAATTTATTCAAAGACGCAGAAGCAGAATACAAGGCCAAGGGGGATGAATC--TTCCT 193777 Query 164723 TACATGTTATTGTTTTTGATGAGATAGATGCTCTTTGCAAAAA---------ACGTGGTG 164773 ||||| | || |||||||||| | ||| || ||| ||| | | | |||| Sbjct 193776 TACATATCATCATTTTTGATGAACTGGATTCTGTTTTCAAGCAGAGAGGTTCAAGAGGTG 193717 Query 164774 ATAATATTATTCATGATG-CAGTG--GTTAATCAGTTGCTTTCTAAAATAGATGGTGTAG 164830 || || | | | || || || |||||||| ||||| ||||||| || ||||| | Sbjct 193716 ATGGTACTGGTGTAGGTGACAATGTAGTTAATCAATTGCTGGCTAAAATGGACGGTGTTG 193657 Query 164831 AATCCTTAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATG 164890 | | |||||||| || | | |||||||||||||| ||||| || ||| || Sbjct 193656 ATCAACTGAATAATATATTGGTCATTGGTATGACCAACCGTAAAGATTTGATCGATATTG 193597 Query 164891 CTTTATTACGACCTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAAG 164950 || | ||||| || ||| |||| ||| | | | ||||| ||||| ||| || ||| Sbjct 193596 CTCTTTTACGTCCAGGTAGATTCGAAGTTCAGGTTGAAATTCATTTACCGGACGAAAAAG 193537 Query 164951 GACGCCTTCAAATTTTAAAAGTTCA 164975 | | || || ||||| || |||| Sbjct 193536 GTAGACTGCAGATTTTTGAAATTCA 193512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871649925200