Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01- 13] 47 sequences; 11,649,856 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq4 122 1e-23 seq45 107 3e-19 >seq4 Length=1132511 Score = 122 bits (134), Expect = 1e-23 Identities = 191/271 (70%), Gaps = 2/271 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | | ||| ||| |||||||||| ||||| ||||| ||||||||||| Sbjct 112540 GCTAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 112482 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | ||||| | | ||||| ||||||||| |||| || || |||| ||||| | Sbjct 112481 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATCTCCGGTTTAATCTACGAAGAAGT 112422 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| |||||| |||| | | |||| ||| || || | || || || Sbjct 112421 CAGAGCTGTCTTGAAGTCCTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACTGA 112362 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | |||||||| || || | ||| | || ||||| ||||| | ||||| Sbjct 112361 ACACGCCAAGAGAAAGACTGTTACTTCTCTAGATGTTGTTTATGCTTTGAAGAGACAAGG 112302 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702 | | | |||||||| || |||||||| Sbjct 112301 TAGAACCTTGTATGGTTTCGGTGGTTAATCT 112271 >seq45 Length=658157 Score = 107 bits (118), Expect = 3e-19 Identities = 186/268 (69%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | |||| ||| |||||||||| ||||| ||||| ||||||||||| Sbjct 459857 GCTAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 459915 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | ||||| | | ||||| ||||||||| |||| || || |||| ||||| | Sbjct 459916 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATCTCCGGTTTAATCTACGAAGAAGT 459975 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| |||||| |||| | | |||| ||| || || | || || || Sbjct 459976 CAGAGCTGTCTTGAAGTCCTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACTGA 460035 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | |||||||| || || | ||| | || || || ||||| | ||||| Sbjct 460036 ACACGCCAAGAGAAAGACTGTTACTTCTCTAGATGTTGTTTACGCTTTGAAGAGACAAGG 460095 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | || ||||| || ||||| Sbjct 460096 TAGAACCTTATACGGTTTCGGTGGTTAA 460123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075157027571