Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01- 13] 47 sequences; 11,649,856 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq35 111 1e-19 seq37 104 2e-17 seq34 93.3 4e-14 seq27 87.8 2e-12 >seq35 Length=393679 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||||||||| || || || || ||||| ||| | ||| ||||| Sbjct 68523 ATGCAGATTTTTGTCAAAACTCTAACTGGTAAGACCATAACCTTGGAAGTTGAGTCTTCT 68464 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| |||| ||||| || || |||||||| ||| | || || || Sbjct 68463 GACACGATTG-ACAATGTAAAGAGTAAGATACAGGATAAAGAGGGCATTCCTCCGGACCA 68405 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || || | |||| ||| || || ||| | ||||||| | ||| || | ||||| || Sbjct 68404 ACAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACGCTGTCTGATTACAA 68345 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| ||||||||||||||| | || |||| |||||| || |||| || Sbjct 68344 CATCCAAAAAGAGTCTACTCTTCACTTGGTCTTGAGACTGAGAGGTGG 68297 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || ||||| || | || || || |||||||| | ||| ||||| Sbjct 68751 ATGCAAATCTTCGTCAAGACATTGACTGGTAAGACCATTACTTTGGAAGTCGAGTCTTCT 68692 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | |||| || || || ||| || || ||||| |||| || || Sbjct 68691 GACACCATCG-ACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATCCCTCCAGACCA 68633 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||||| |||| ||| || || ||| | || |||| | ||| || | || ||||| Sbjct 68632 ACAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAACTTTGTCAGACTATAA 68573 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||| |||||||| | || | || || ||| || |||| || Sbjct 68572 CATTCAAAAGGAGTCTACCCTTCACTTAGTTTTAAGACTGAGAGGTGG 68525 >seq37 Length=384943 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || ||||||||||| ||||| || | || || || || |||||| | ||| || || Sbjct 8706 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 8765 Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 |||||| || ||||| || || || ||| || || ||||| | || ||| Sbjct 8766 TCAGACACTATT-GACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGA 8824 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 || |||||| | || | ||| || || ||||| ||||| | || ||| || | || || Sbjct 8825 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTA 8884 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| ||||| ||||| ||| |||| |||| ||||||||| |||| || Sbjct 8885 CAACATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGG 8935 >seq34 Length=182383 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438 || |||||||| |||| ||| || |||||| | || | ||| || || ||||| ||| Sbjct 150045 GACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAA 149986 Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 || | | |||| || |||| || ||||||||||| || || ||| ||||| | || ||| Sbjct 149985 GACGGTAGAACCTTGTCCGACTACAACATTCAAAAGGAATCCACTTTACATTTAGTCTTG 149926 Query 115499 AGATTGCGAGGAGG 115512 |||||| |||| || Sbjct 149925 AGATTGAGAGGTGG 149912 >seq27 Length=402821 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 115294 TTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGT 115353 |||||||||||| | || || || ||||| || | ||| || || ||||| | Sbjct 49971 TTTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCAT 50030 Query 115354 TGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGAC 115412 | ||||| || || ||| ||| || || ||||| |||| ||| || |||||| Sbjct 50031 T-GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGAT 50089 Query 115413 TTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAA 115472 | || | ||| || || ||||| ||||| | | |||| || | || || || || |||| Sbjct 50090 TAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAATATCCAAA 50149 Query 115473 AAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 | || || ||| ||||| | || ||||||||| |||| || Sbjct 50150 AGGAATCCACTTTACATTTAGTTTTGAGATTGAGAGGTGG 50189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425343756357640