Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01- 13] 47 sequences; 11,649,856 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq37 129 4e-25 seq27 122 6e-23 seq34 109 4e-19 seq35 104 2e-17 >seq37 Length=384943 Score = 129 bits (142), Expect = 4e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||||||||| | ||| ||||| || | |||| ||||||||| || ||||| ||||| Sbjct 8936 ACCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGA 8877 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 |||| | |||| || ||||| || || ||||| || | | |||||| || | || Sbjct 8876 CAAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 8817 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 | ||||| ||||| ||| || ||| ||||| | | ||| ||| | |||||| Sbjct 8816 AATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAAC 8757 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 ||| | |||||||| ||||| || || || || ||||| || ||||| || Sbjct 8756 TTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8706 >seq27 Length=402821 Score = 122 bits (134), Expect = 6e-23 Identities = 159/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||||||| | ||| || ||||| | |||| |||||||| |||||||| |||| Sbjct 50191 TACCACCTCTCAATCTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAG 50132 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| | |||| || ||||| || || ||||| |||| | |||||| || | | Sbjct 50131 ACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAG 50072 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| ||||| ||| ||| ||| ||||| | | || || | ||||| Sbjct 50071 GGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATGGTGTCAGAAGATTCAA 50012 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAA 38308 |||| || || || || ||||| ||||| ||||| || || Sbjct 50011 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAA 49972 >seq34 Length=182383 Score = 109 bits (120), Expect = 4e-19 Identities = 156/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||||||| | ||| || ||||| | |||| ||||||||||| ||||| || | Sbjct 149910 TACCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGG 149969 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| | |||| || ||||| || || ||||| || | | |||||| || | | Sbjct 149970 ACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 150029 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||||||||| ||| || || ||||| | | || || | ||||| Sbjct 150030 GGATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAA 150089 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAA 38308 |||||| || || || ||||| ||||| || || ||||| Sbjct 150090 CTTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 150129 >seq35 Length=393679 Score = 104 bits (114), Expect = 2e-17 Identities = 163/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||||| | ||| ||||| || ||||| ||||||||| || |||||||||| Sbjct 68979 TACCACCTCTCAGTCTCAAGACCAAGTGCAGAGTAGACTCCTTTTGGATGTTGTAATCAG 69038 Query 38149 ACAAAACACGTT----CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204 ||| |||| |||| || | ||||| || ||||| || | | |||||||| Sbjct 69039 ACA----GCGTTCTGCCGTCTTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCC 69094 Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT 38264 | || | ||||| ||||| ||| || ||| || || | || || || Sbjct 69095 GGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCGGAGGAC 69154 Query 38265 TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || ||||| ||||| || ||||| ||||| || || ||||| |||||||| Sbjct 69155 TCGACCTCTAAAGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 69207 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||||| | || || || ||||| || |||||||||||| || || || | Sbjct 68523 TACCACCTCTCAGTCTTAAAACTAAGTGAAGGGTAGACTCCTTTTGAATGTTATAGTCTG 68582 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||||| | | || || | ||| || || ||||| || || | |||||| || | | Sbjct 68583 ACAAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAG 68642 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| ||||| ||| || ||| || || | || || || | || | Sbjct 68643 GGATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGA 68702 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| || ||||| || ||||| ||||| || || ||||| || ||||| Sbjct 68703 CTTCCAAAGTAATGGTCTTACCAGTCAATGTCTTGACGAAGATTTGCAT 68751 Score = 95.1 bits (104), Expect = 8e-15 Identities = 161/233 (69%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||||| | ||| ||||| |||||||| ||| ||||| || |||||||||| Sbjct 68295 TACCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCAG 68354 Query 38149 ACAAAACACGTT----CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204 ||| |||| | || || | ||| || |||||||| || | | ||||| || Sbjct 68355 ACA----GCGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCC 68410 Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT 38264 | || | ||| ||||| ||| || || ||| ||||| | | || || | Sbjct 68411 GGAGGAATGCCCTCTTTATCCTGTATCTTACTCTTTACATTGTCAATCGTGTCAGAAGAC 68470 Query 38265 TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||||||| || || || || ||||| || | ||||| || || |||||||| Sbjct 68471 TCAACTTCCAAGGTTATGGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 68523 Score = 95.1 bits (104), Expect = 8e-15 Identities = 161/233 (69%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| | | || ||||| || ||||| ||||||||| || |||||||||| Sbjct 68751 TACCACCTCTTAGTCTTAAGACCAAGTGCAGAGTAGACTCCTTTTGGATGTTGTAATCAG 68810 Query 38149 ACAAAACACGTT----CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204 ||| |||| |||| || | ||||| || ||||| || | | |||||||| Sbjct 68811 ACA----GCGTTCTGCCGTCTTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCC 68866 Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT 38264 | || | ||||| ||||| ||| || ||| || || | || || || | Sbjct 68867 GGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCAGAAGAC 68926 Query 38265 TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || ||||| || || || ||||| ||||| || || ||||| |||||||| Sbjct 68927 TCGACCTCTAAGGTTATGGTCTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 68979 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 38087 ATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATC 38146 ||| |||||||| | | | ||||| || |||||| |||||||||||| || || || Sbjct 68065 ATTGCCACCTCTTAGTCTTAGGACCAAGTGCAGAGTGGACTCCTTTTGAATGTTATAGTC 68124 Query 38147 AGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGA 38206 |||||| | | || || || || || || ||||| || | | |||||| || | Sbjct 68125 CGACAAAGTTCTACCATCCTCCAACTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGG 68184 Query 38207 GGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTC 38266 || | ||||| ||||| ||| || ||| || || | || || || | || Sbjct 68185 AGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCAGAAGACTC 68244 Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || ||||| || || || ||||| ||||| || || ||||| |||||||| Sbjct 68245 GACCTCTAAGGTTATGGTCTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 68295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947008138057