Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01- 13] 47 sequences; 11,649,856 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq29 226 5e-54 >seq29 Length=397901 Score = 226 bits (250), Expect = 5e-54 Identities = 585/874 (67%), Gaps = 28/874 (3%) Strand=Plus/Plus Query 42285 ATCGAGCACCAGGACATCTGGTCCAT-GTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343 ||| || |||| || |||||| | || ||||||| || || ||| |||||| || Sbjct 365567 ATCCAGTACCACGAGATCTGG-CAATCGTACAAGCGTGCCGAGGCCTCTTTCTGGACTGC 365625 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTC---ACTGTCTGAGAACGA 42400 |||||| || || || ||||||| | | |||| | | || || ||||| Sbjct 365626 CGAGGAAATCGATTTGTCCAAGGATATCCATGACTGGAACAACAGAATGAACGAAAACGA 365685 Query 42401 AAAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGA 42460 || ||| ||| || || | || ||||||||||||||||| ||||| || ||||| || Sbjct 365686 AAGGTTCTTCATCTCAAGAGTCCTTGCCTTCTTCGCCGCCTCCGACGGTATTGTCAACGA 365745 Query 42461 GAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGG 42520 ||| ||| | | ||| | ||||| ||| | || || | |||||||| Sbjct 365746 AAACTTGGTCGAGAATTTCTCCACCGAGGTCCAGATCCCGGAAGCCAAGAGTTTCTACGG 365805 Query 42521 CTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTA 42580 ||||| || || || || ||| | || || || ||| || || || | || || Sbjct 365806 TTTCCAAATCGCTATCGAAAACATTCATTCCGAAACCTACTCCTTGTTGATCGATACCTA 365865 Query 42581 CATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCAT 42640 |||| |||||| || || | ||||||| ||||| || || || || || Sbjct 365866 CATCAAGGATCCAAAGGAAAGTGAATTCTTGTTCAACGCCATCGACACCATCCCAGAAAT 365925 Query 42641 CAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCC-GACGCAACGTTCGGCG 42699 ||||||| || ||||| || | |||||| | || | | ||||| |||||| | Sbjct 365926 TTGCGAGAAGGCCGAATGGGCCCTTAGATGGATCCA-AGACGCAGACGCGCTGTTCGGTG 365984 Query 42700 AGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCA 42759 | || || || ||||| || || |||| || | |||||||| || |||||||||||| Sbjct 365985 AAAGACTAGTCGCCTTCGCCTCCATCGAAGGTGTTTTCTTCTCCGGGTCCTTCGCCTCCA 366044 Query 42760 TCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATC 42818 |||||||| | ||| ||| |||| | ||||||||| | |||||||| ||||| | ||| Sbjct 366045 TCTTCTGGTTGAAGAAGAGAGGTAT-GATGCCCGGGTTGACCTTCTCCAACGAGTTGATC 366103 Query 42819 AGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGG 42878 |||| ||||| || |||| | ||||||||||| | ||||| | ||| | | | Sbjct 366104 TGCAGAGACGAAGGTTTGCACACCGACTTTGCCTGTTTGTTGTTCGC---CCATTTGAAG 366160 Query 42879 CACAAGCCCTCGAAGGAGC--GGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGA-- 42934 ||||||| || ||| ||| | ||| |||| |||||||| |||||||| Sbjct 366161 AACAAGCC--GGACCCAGCCATCGTCGAGAAAATCGTCACCGAGGCCGTCGAGATCGAAC 366218 Query 42935 GAAG-GAGTTCCTCACGCAGTCGC--TGCCCGTGTCCCTGGTCGGCATGAACCACGACCT 42991 ||| | ||||| || ||| |||| || || || | || ||||| |||| | Sbjct 366219 AAAGATACTTCCT-----AGACGCCTTGCCAGTCGCCTTGCTAGGTATGAATGCCGACTT 366273 Query 42992 CATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCG 43051 ||| | ||||| || ||| |||||| ||| || || | | ||| || Sbjct 366274 GATGAACCAGTACGTCGAGTTCGTCGCAGACAGACTGTTGGTCGCCTTCGGTAACAAGAA 366333 Query 43052 CCTCTACAA-CACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGA 43110 |||||| || | ||||||||| || ||||| ||||| || |||| || |||| Sbjct 366334 GTACTACAAGGTCGAC-AACCCCTTCGATTTCATGGAAAACATTTCCTTGGCCGGTAAGA 366392 Query 43111 CCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 ||||||| ||||| ||| | ||| |||||||||| Sbjct 366393 CCAACTTCTTCGAAAAGAGAGTCTCCGACTACCA 366426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338645200720