Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01-
13] 47 sequences; 11,649,856 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq35 114 1e-20
seq34 98.7 1e-15
seq27 95.1 1e-14
seq12 87.8 2e-12
>seq35
Length=393679
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || || |||||||| ||||||||||| | | || | | ||||| || |||
Sbjct 68321 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCAGACAGCGTTCTACCATCTTCCAGTTGC 68380
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|| |||||| |||| | || ||| ||||| |||||||| || ||||| || ||||| ||
Sbjct 68381 TTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGAATGCCCTCTTTATCCTGTATCTTA 68440
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||||||| || | || ||| | || ||||| | |||| |||||| || ||
Sbjct 68441 CTCTTTACATTGTCAATCGTGTCAGAAGACTCAACTTCCAAGGTTATGGTCTTACCAGTT 68500
Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443
| |||||| || ||||| |||||
Sbjct 68501 AGAGTTTTGACAAAAATCTGCAT 68523
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || ||||| ||||||||||| | | || | ||||||| ||||| || ||
Sbjct 68783 GTAGACTCCTTTTGGATGTTGTAATCAGACAGCGTTCTGCCGTCTTCCAGCTGTTTACCA 68842
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| |||| | || ||| || || |||||||| ||||| || ||||| || || |||
Sbjct 68843 GCAAAAATCAACCTCTGTTGATCCGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTG 68902
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | || ||| | || || |||| |||| |||||| |||||||||||
Sbjct 68903 ACGTTGTCGATCGTGTCAGAAGACTCGACCTCTAAGGTTATGGTCTTACCGGTCAAAGTC 68962
Query 64427 TTTACGAAAATTTGCAT 64443
|| |||||||| |||||
Sbjct 68963 TTGACGAAAATCTGCAT 68979
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || ||||| ||||||||||| | | || | ||||||| ||||| || ||
Sbjct 69011 GTAGACTCCTTTTGGATGTTGTAATCAGACAGCGTTCTGCCGTCTTCCAGCTGTTTACCA 69070
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| |||| | || ||| || || |||||||| ||||| || ||||| || || |||
Sbjct 69071 GCAAAAATCAACCTCTGTTGATCCGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTG 69130
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | || || || || || |||| ||| | |||||| || ||||||||
Sbjct 69131 ACGTTGTCGATCGTGTCGGAGGACTCGACCTCTAAAGTAATGGTCTTACCAGTCAAAGTC 69190
Query 64427 TTTACGAAAATTTGCAT 64443
|| |||||||| |||||
Sbjct 69191 TTGACGAAAATCTGCAT 69207
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | || ||| | |||| |||| || || || ||||||||||| || ||||
Sbjct 68524 ACCACCTCTCAGTCTTAAAACTAAGTGAAGGGTAGACTCCTTTTGAATGTTATAGTCTGA 68583
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | | || || || ||||| || ||| |||| || | || ||||| |||||
Sbjct 68584 CAAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGG 68643
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| ||||| || ||||| || || ||| || || | || ||| | || ||
Sbjct 68644 GATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGAC 68703
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| | ||| | |||||| || ||||| || || ||||| ||||||||
Sbjct 68704 TTCCAAAGTAATGGTCTTACCAGTCAATGTCTTGACGAAGATTTGCAT 68751
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || ||||||||||| || || | | || | | || || | |||||| ||
Sbjct 68099 GTGGACTCCTTTTGAATGTTATAGTCCGACAAAGTTCTACCATCCTCCAACTGCTTACCA 68158
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| |||| | | || ||||| |||||||| ||||| || ||||| || || |||
Sbjct 68159 GCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTG 68218
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | || ||| | || || |||| |||| |||||| |||||||||||
Sbjct 68219 ACGTTGTCGATCGTGTCAGAAGACTCGACCTCTAAGGTTATGGTCTTACCGGTCAAAGTC 68278
Query 64427 TTTACGAAAATTTGCAT 64443
|| |||||||| |||||
Sbjct 68279 TTGACGAAAATCTGCAT 68295
>seq34
Length=182383
Score = 98.7 bits (108), Expect = 1e-15
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | |||||| | |||| ||| | || ||||| |||||||||||||| || |
Sbjct 149911 ACCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGA 149970
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| | ||||||| | ||||| || ||| | || | | || ||||| || ||
Sbjct 149971 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 150030
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| |||||||| ||||| || || || ||| || | || ||| | || ||
Sbjct 150031 GATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAAC 150090
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434
||||| ||| | |||||| || |||||||| || |||||
Sbjct 150091 TTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 150129
>seq27
Length=402821
Score = 95.1 bits (104), Expect = 1e-14
Identities = 153/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | |||||| | |||| ||| | || ||||| ||||| || ||||| || |
Sbjct 50190 ACCACCTCTCAATCTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAGA 50131
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| | ||||||| | ||||| || ||| | || | | || ||||| |||||
Sbjct 50130 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGG 50071
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| ||||| || ||||| || ||| ||| ||| || | || ||| | || ||
Sbjct 50070 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATGGTGTCAGAAGATTCAAC 50011
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435
||| | ||| | |||||| || ||||||||||| || |||
Sbjct 50010 TTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAAA 49971
>seq12
Length=580751
Score = 87.8 bits (96), Expect = 2e-12
Identities = 208/305 (68%), Gaps = 7/305 (2%)
Strand=Plus/Minus
Query 155182 CCAA-ACCTCC-GCCGTATTTAGATATTTGCGCACAGTCCGCCAAAGTTTCGTACATTCC 155239
|||| |||||| || || |||||| || ||||| ||| |||||| ||||| || ||
Sbjct 305595 CCAATACCTCCAGCAGT-TTTAGAAATCAAAGCACATTCCTTCAAAGTATCGTAAATACC 305537
Query 155240 TTTGATGCTGTCTTCTTTCAACGTCAAC-AAGAAACACGAAGATAATTGAGGTTGAGGGC 155298
|| ||| || || |||| | |||| |||||||| || || | |||||| | ||
Sbjct 305536 TTCAATGGAATCATCCTTCATTG-CAACTAAGAAACAGGAGGACATTTGAGGCTTTGGAG 305478
Query 155299 AGCCGGCCGCAAATAATGTAGGACTAGCGTGTGTAAAC-ATTTTGTTGGCGGTTAAGTTG 155357
|| || ||||| || ||| || || ||||| ||||| | | |||||||
Sbjct 305477 TACCAGCGTTGAATAAAGTTGGAGAGGCATGAGTAAAGTATTTTAGAGACA-TTAAGTTA 305419
Query 155358 TAAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCATCAGC 155417
|| ||||| | ||||| ||||||| |||||| ||||| | || || | ||| |
Sbjct 305418 TAGGTTTCTAAAGCGGCCTCAATGTTTTCACCGTGAATACCTAGGGCGACTCTCATGATT 305359
Query 155418 ATGTGTTGAATGCGCTCCGCAACGCGGCCGTTGATGCGCTTTAAGTACCCATTTTCCAAA 155477
| ||| || || || ||||| | |||||||| | | |||||| | |||||||
Sbjct 305358 AAGTGCTGTGGACGTTCAGCAACTTGACCGTTGATTCTCAATAAGTAAGAACGTTCCAAA 305299
Query 155478 GTTTT 155482
|||||
Sbjct 305298 GTTTT 305294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644506458680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |