Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01- 13] 47 sequences; 11,649,856 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq12 134 1e-26 seq27 105 7e-18 >seq12 Length=580751 Score = 134 bits (148), Expect = 1e-26 Identities = 474/732 (65%), Gaps = 19/732 (3%) Strand=Plus/Plus Query 93907 TTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGGCC 93966 |||||||| || || || ||| || ||||| || |||||| | | | | |||| Sbjct 305465 TTCAACGCTGGTACTCCAAAGCCTCAAATGTCCTCCTGTTTCTTAGTTGCAATGAAGGAT 305524 Query 93967 GACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCG 94026 || ||||| || |||| ||| | | ||||| ||||| || || ||| || Sbjct 305525 GATTCCATTGAAGGTATTTACGATACTTTGAAGGAATGTGCTTTGATTTCTAAAACTGCT 305584 Query 94027 GGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACC 94086 || || || || | | ||||| || | ||||| | || || ||||| ||||| Sbjct 305585 GGAGGTATTGGTCTACATATCCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACA 305644 Query 94087 AATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTAC 94146 || || || || ||||| | | |||||| |||| ||||||||||| | || || || Sbjct 305645 AACGGGACTTCTAACGGGTTAATTCCTATGATCCGTGTCTTCAACAATACTGCCCGTTAT 305704 Query 94147 GTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCAC 94206 || ||||| |||||| | ||| ||| | || || | ||| | ||||| |||||| Sbjct 305705 GTTGACCAAGGTGGTAACAAGAGACCTGGTGCCTTTGCCCTATATTTGGAGCCATGGCAC 305764 Query 94207 GCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA---GG 94263 || || | | ||||||||| | ||||||| ||||| || || || | | Sbjct 305765 GCTGATATCTTCGACTTCATCGACATTAGAAAGAATCACGGTAAGGA---AGAAATCCGT 305821 Query 94264 GCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAA 94323 || ||||| | ||| ||||| ||||| ||||| ||||| ||||| || ||||| || Sbjct 305822 GCAAGAGATTTATTCCCAGCTCTATGGGTTCCAGATCTTTTCATGAAGCGTGTCGAAGAA 305881 Query 94324 AACTCCGCCTGGAGTCTTTTTTGTC-CCAATGAATGTCCC-GGACTGTCCGACGTTTGTG 94381 ||| | | |||| |||| || || || | || ||| || || ||| || | Sbjct 305882 AACGGCACTTGGA--CTTTATTCTCTCCTACATCTGCCCCAGGCTTGAGTGACTGTTACG 305939 Query 94382 GATCGCGTTTTGAAGACTTGTATGCTCGTTACG-AATCGCAGGGCAAGGCCAGGAAGGTT 94440 | || |||| | | ||| | ||||||| || | ||| | | | ||| | Sbjct 305940 GTGATGAATTCGAAGCCCTATATACCCGTTACGAAAAAGAAGGTCGTG----GTAAGACT 305995 Query 94441 ATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCC 94500 || | || || | ||| | ||| |||| | ||| ||| || ||||| || Sbjct 305996 ATCAAGGCCCAAAAATTATGGTACTCTATCTTGGAAGCACAAACGGAAACTGGTACACC- 306054 Query 94501 TACATCTTGTT--CAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGA 94558 | | ||||| |||||| || ||| || |||||||| || || | || || | Sbjct 306055 -ATTTGTTGTTTACAAGGATGCTTGTAACAGGAAATCCAACCAAAAGAACTTGGGTGTTA 306113 Query 94559 TCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTG 94618 ||||| || ||| ||||| || ||||| || || || |||| || |||| ||||| Sbjct 306114 TCAAGTCATCTAATTTGTGCTGTGAAATTGTTGAATACTCTGCTCCAGATGAGACTGCTG 306173 Query 94619 TGTGTAACCTGG 94630 | |||||| ||| Sbjct 306174 TTTGTAACTTGG 306185 >seq27 Length=402821 Score = 105 bits (116), Expect = 7e-18 Identities = 471/737 (64%), Gaps = 17/737 (2%) Strand=Plus/Minus Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955 |||| || || || || || || || || || || |||||||| ||||||||||| Sbjct 215902 CCCCCACACTATTTAATGCCGGTACGCCACATCCTCAAATGTCTTCTTGTTTCCTGATTG 215843 Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015 | | |||| ||||||||| || |||| ||||| | || || ||||| | || | Sbjct 215842 CCATGAAGGACGACTCCATTGAAGGTATTTACGACACTTTGAAAGAGTGTGCCATGATTT 215783 Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075 | || || || || | || | | || || | | ||| ||| || || || | Sbjct 215782 CCAAGACTGCAGGTGGTGTTGGTCTTCATATCAACAATATTCGTTCCACAGGCTCTTATA 215723 Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135 | |||||||| || || || ||||| | | || ||| |||| |||||||||||| Sbjct 215722 TTGCAGGTACCAACGGTACTTCAAACGGGTTGATTCCCATGATCCGTGTCTTCAACAACA 215663 Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195 | || || ||||||||||| |||||| | ||| ||| | || || | | | | Sbjct 215662 CTGCACGTTACGTGGACCAAGGTGGTAACAAGAGACCCGGTGCCTTTGCCCTTTTCTTGG 215603 Query 94196 AGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATC 94255 |||| ||||| || ||| | | || |||| | |||||| || || || || Sbjct 215602 AGCCATGGCATGCAGACATCTTCGACTTTGTCGATATCAGAAAGACTCATGGTAAGGA-- 215545 Query 94256 TGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 || | | || ||||| | ||| ||||| ||| | || || ||||| ||||| | Sbjct 215544 -AGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCCGATCTTTTCATGAAGC 215486 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTC-CCAATGAATGTCCC-GGACTGTC 94370 | ||||| | | ||||||| | || || || |||| || ||| || || Sbjct 215485 GTGTCGAAGAGGATGGGGCCTGGA--CCTTATTCTCACCAAGTGCTGCCCCAGGTTTGGA 215428 Query 94371 CGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC 94430 ||||||||| || || ||||| | ||| | ||||||||| || | | | | Sbjct 215427 CGACGTTTGGGGTGAAGAATTCGAAGAGCTATATACCCGTTACGAA----AGAGAAGGTC 215372 Query 94431 CAGG-AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489 || || || | ||| ||| | ||| | ||| || | | ||| || | Sbjct 215371 GTGGTAAAACCATCAAGGCTCAAAAGGTATGGTACGCCATCTTGCAAGCACAAACAGAAA 215312 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCAC 94548 | ||||| |||| ||| | | ||||| |||| ||| ||| ||||||| || || Sbjct 215311 CCGGTACACCCTTCATGGTTTATAAGGATGCCTGT-AACAGAAAGACCAACCAACAAAAC 215253 Query 94549 CTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGAC 94608 || || ||||| || || |||| ||| || ||||||||| |||| || || Sbjct 215252 CTGGGTACCATCAAATCGTCAAACTTGTGTTGCGAAATCGTCGAGTATTCTTCCCCAGAT 215193 Query 94609 GAGATTGCTGTGTGTAA 94625 || | |||||| ||||| Sbjct 215192 GAAACTGCTGTTTGTAA 215176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722909350120