Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01- 13] 47 sequences; 11,649,856 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq29 111 2e-19 seq27 109 5e-19 seq34 104 2e-17 seq35 102 8e-17 seq37 84.2 2e-11 >seq29 Length=397901 Score = 111 bits (122), Expect = 2e-19 Identities = 292/437 (67%), Gaps = 9/437 (2%) Strand=Plus/Plus Query 52404 GTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTAC 52463 || ||||||||| |||| || || || || ||||| ||| ||| ||||||| | Sbjct 365993 GTCGCCTTCGCCTCCATCGAAGGTGTTTTCTTCTCCGGGTCCTTCGCCTCCATCTTCTGG 366052 Query 52464 ATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGAC 52523 | || | || ||| || |||||||| |||| ||| |||||||||||| | | ||| Sbjct 366053 TTGAAGAAGAGAGGTATGATGCCCGGGTTGACCTTCTCCAACGAGTTGATCTGCAGAGAC 366112 Query 52524 GAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTG 52583 ||||| ||||||| |||||||| || | | | | | | ||| | || | Sbjct 366113 GAAGGTTTGCACACCGACTTTGCCTGTTTGTTGTTC---GCCCATTTGAAGAACAAGCCG 366169 Query 52584 GATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAA-AAGGAGTTTTT 52642 || | | || || || || ||| ||||| || | |||||| || || | || Sbjct 366170 GACCCAGCCATCGTCGAGAAAATCGTCACCGAGGCCGTCGAGATCGAACAAAGA-TACTT 366228 Query 52643 TACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACAT 52702 | ||| |||| |||| |||| || ||||| || | | ||| | ||||| | Sbjct 366229 CCTAGACGCCTTGCCAGTCGCCTTGCTAGGTATGAATGCCGACTTGATGAACCAGTACGT 366288 Query 52703 CGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTACTTCAACGCTC 52761 |||||| || || || | |||||||| | || || | | | ||||||| ||| | || Sbjct 366289 CGAGTTCGTCGCAGACAGACTGTTGGT-CGCCTTCGGTAACAAGAAGTACTACAA-GGTC 366346 Query 52762 G-CAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAG 52820 | ||| || || || || ||| | |||||||| | | || ||||||||||| ||||| Sbjct 366347 GACAACCCCTTCGATTTCATGGAAAACATTTCCTTGGCCGGTAAGACCAACTTCTTCGAA 366406 Query 52821 AAGCGAGTCGGCGAGTA 52837 ||| ||||| ||| || Sbjct 366407 AAGAGAGTCTCCGACTA 366423 >seq27 Length=402821 Score = 109 bits (120), Expect = 5e-19 Identities = 159/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | |||||||||||||| | || |||||||| || |||||||| | Sbjct 50189 CCACCTCTCAATCTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAGAC 50130 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||| || | ||| ||||| | | |||||| | |||||||| ||||| Sbjct 50129 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGG 50070 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| ||||| ||| | |||| || |||| || | |||||| | || || | Sbjct 50069 ATACCTTCCTTGTC-TTGAATCTTTGACTTGACATTG-TCAATGGTGTCAGAAGATTCAA 50012 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606 | || | || | || |||||||||| |||||| |||||| Sbjct 50011 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAAA 49971 >seq34 Length=182383 Score = 104 bits (114), Expect = 2e-17 Identities = 157/220 (71%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| |||||||||| | || ||||||||||||||||||||| | Sbjct 149912 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 149971 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||| || | ||| ||||| | | |||| | | |||||||| || || Sbjct 149972 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 150031 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||||||||| ||| | || | ||| |||| || | |||||| | || || | Sbjct 150032 ATACCTTCTTTGTC-TTGAATCTTGGATTTGACATTG-TCAATGGTGTCAGAAGATTCAA 150089 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAA 138605 | || | || | || |||||||||| ||| || || || Sbjct 150090 CTTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 150129 >seq35 Length=393679 Score = 102 bits (112), Expect = 8e-17 Identities = 153/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 |||||||| || | | | ||||||||||||||||| ||||| || ||| | ||| Sbjct 68540 AAAACTAAGTGAAGGGTAGACTCCTTTTGAATGTTATAGTCTGACAAAGTTCTACCATCC 68599 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || ||||| ||||| | | | || || | |||||||| ||||| |||||||| ||||| Sbjct 68600 TCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGGATACCTTCCTTGTC- 68658 Query 138523 GTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| | || | || | ||| || | |||||| | ||||| || || | || | | Sbjct 68659 TTGAATCTTGGACTTGACGTTG-TCGATGGTGTCAGAAGACTCGACTTCCAAAGTAATGG 68717 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | |||||||||| || || || || || ||||| Sbjct 68718 TCTTACCAGTCAATGTCTTGACGAAGATTTGCAT 68751 Score = 102 bits (112), Expect = 8e-17 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || | ||| || || || | | ||||||||||| |||||||| || | Sbjct 68981 CCACCTCTCAGTCTCAAGACCAAGTGCAGAGTAGACTCCTTTTGGATGTTGTAATCAGAC 69040 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||| || || |||||||| | | | || | | |||||| |||||||| Sbjct 69041 AGCGTTCTGCCGTCTTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCCGGAGGA 69100 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| ||||| ||| | || | || | ||| || | ||||||| ||||| | Sbjct 69101 ATACCTTCCTTGTC-TTGAATCTTGGACTTGACGTTG-TCGATCGTGTCGGAGGACTCGA 69158 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || |||||||||| ||| || || ||||||||||| Sbjct 69159 CCTCTAAAGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 69207 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || | ||| || || || | | ||||| ||||| |||||||| || | Sbjct 68297 CCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCAGAC 68356 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | || || ||||| ||||||| | | || | | ||||||||||||||| Sbjct 68357 AGCGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGA 68416 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || ||||| || || || |||| ||||| | | ||||| | ||||| || Sbjct 68417 ATGCCCTCTTTATCCTGTATCTTACTCTTTACATTGT-CAATCGTGTCAGAAGACTCAAC 68475 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || |||||||| |||||||| |||||||||||||| Sbjct 68476 TTCCAAGGTTATGGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 68523 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| |||||||| || || || | ||| || || |||||||| | | Sbjct 68786 GACTCCTTTTGGATGTTGTAATCAGACAGCGTTCTGCCGTCTTCCAGCTGTTTACCAGCA 68845 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 | || | | |||||| |||||||| |||||||| ||||| ||| | || | || | Sbjct 68846 AAAATCAACCTCTGTTGATCCGGAGGAATACCTTCCTTGTC-TTGAATCTTGGACTTGAC 68904 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||| | ||||| ||||| | || | || ||||| |||| ||| | Sbjct 68905 GTTG-TCGATCGTGTCAGAAGACTCGACCTCTAAGGTTATGGTCTTACCGGTCAAAGTCT 68963 Query 138599 TTACAAAAATCTGCAT 138614 | || ||||||||||| Sbjct 68964 TGACGAAAATCTGCAT 68979 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||||||||| ||||| || ||| | ||||| | || ||||| | | Sbjct 68102 GACTCCTTTTGAATGTTATAGTCCGACAAAGTTCTACCATCCTCCAACTGCTTACCAGCA 68161 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 | || | | |||||||| ||||| |||||||| ||||| ||| | || | || | Sbjct 68162 AAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTC-TTGAATCTTGGACTTGAC 68220 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||| | ||||| ||||| | || | || ||||| |||| ||| | Sbjct 68221 GTTG-TCGATCGTGTCAGAAGACTCGACCTCTAAGGTTATGGTCTTACCGGTCAAAGTCT 68279 Query 138599 TTACAAAAATCTGCAT 138614 | || ||||||||||| Sbjct 68280 TGACGAAAATCTGCAT 68295 >seq37 Length=384943 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| || || |||| | ||||||||||| ||||||||||| | Sbjct 8935 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 8876 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | ||| || | ||| ||||| | | |||| | | |||||||| || || Sbjct 8875 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8816 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| ||||| ||| | || | || |||| || | ||||| | || || | Sbjct 8815 ATACCTTCCTTGTC-TTGAATCTTAGACTTGACATTG-TCAATAGTGTCTGAAGATTCAA 8758 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | || | || ||||| || | ||| || || ||||| ||||| Sbjct 8757 CTTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 8709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262108445840