Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01-
13] 47 sequences; 11,649,856 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq29 111 2e-19
seq27 109 5e-19
seq34 104 2e-17
seq35 102 8e-17
seq37 84.2 2e-11
>seq29
Length=397901
Score = 111 bits (122), Expect = 2e-19
Identities = 292/437 (67%), Gaps = 9/437 (2%)
Strand=Plus/Plus
Query 52404 GTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTAC 52463
|| ||||||||| |||| || || || || ||||| ||| ||| ||||||| |
Sbjct 365993 GTCGCCTTCGCCTCCATCGAAGGTGTTTTCTTCTCCGGGTCCTTCGCCTCCATCTTCTGG 366052
Query 52464 ATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGAC 52523
| || | || ||| || |||||||| |||| ||| |||||||||||| | | |||
Sbjct 366053 TTGAAGAAGAGAGGTATGATGCCCGGGTTGACCTTCTCCAACGAGTTGATCTGCAGAGAC 366112
Query 52524 GAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTG 52583
||||| ||||||| |||||||| || | | | | | | ||| | || |
Sbjct 366113 GAAGGTTTGCACACCGACTTTGCCTGTTTGTTGTTC---GCCCATTTGAAGAACAAGCCG 366169
Query 52584 GATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAA-AAGGAGTTTTT 52642
|| | | || || || || ||| ||||| || | |||||| || || | ||
Sbjct 366170 GACCCAGCCATCGTCGAGAAAATCGTCACCGAGGCCGTCGAGATCGAACAAAGA-TACTT 366228
Query 52643 TACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACAT 52702
| ||| |||| |||| |||| || ||||| || | | ||| | ||||| |
Sbjct 366229 CCTAGACGCCTTGCCAGTCGCCTTGCTAGGTATGAATGCCGACTTGATGAACCAGTACGT 366288
Query 52703 CGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTACTTCAACGCTC 52761
|||||| || || || | |||||||| | || || | | | ||||||| ||| | ||
Sbjct 366289 CGAGTTCGTCGCAGACAGACTGTTGGT-CGCCTTCGGTAACAAGAAGTACTACAA-GGTC 366346
Query 52762 G-CAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAG 52820
| ||| || || || || ||| | |||||||| | | || ||||||||||| |||||
Sbjct 366347 GACAACCCCTTCGATTTCATGGAAAACATTTCCTTGGCCGGTAAGACCAACTTCTTCGAA 366406
Query 52821 AAGCGAGTCGGCGAGTA 52837
||| ||||| ||| ||
Sbjct 366407 AAGAGAGTCTCCGACTA 366423
>seq27
Length=402821
Score = 109 bits (120), Expect = 5e-19
Identities = 159/221 (72%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | |||||||||||||| | || |||||||| || |||||||| |
Sbjct 50189 CCACCTCTCAATCTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAGAC 50130
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || | ||| ||||| | | |||||| | |||||||| |||||
Sbjct 50129 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGG 50070
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| ||| | |||| || |||| || | |||||| | || || |
Sbjct 50069 ATACCTTCCTTGTC-TTGAATCTTTGACTTGACATTG-TCAATGGTGTCAGAAGATTCAA 50012
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606
| || | || | || |||||||||| |||||| ||||||
Sbjct 50011 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAAA 49971
>seq34
Length=182383
Score = 104 bits (114), Expect = 2e-17
Identities = 157/220 (71%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| |||||||||| | || ||||||||||||||||||||| |
Sbjct 149912 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 149971
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || | ||| ||||| | | |||| | | |||||||| || ||
Sbjct 149972 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 150031
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||||||||| ||| | || | ||| |||| || | |||||| | || || |
Sbjct 150032 ATACCTTCTTTGTC-TTGAATCTTGGATTTGACATTG-TCAATGGTGTCAGAAGATTCAA 150089
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAA 138605
| || | || | || |||||||||| ||| || || ||
Sbjct 150090 CTTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 150129
>seq35
Length=393679
Score = 102 bits (112), Expect = 8e-17
Identities = 153/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462
|||||||| || | | | ||||||||||||||||| ||||| || ||| | |||
Sbjct 68540 AAAACTAAGTGAAGGGTAGACTCCTTTTGAATGTTATAGTCTGACAAAGTTCTACCATCC 68599
Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522
|| ||||| ||||| | | | || || | |||||||| ||||| |||||||| |||||
Sbjct 68600 TCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGGATACCTTCCTTGTC- 68658
Query 138523 GTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580
||| | || | || | ||| || | |||||| | ||||| || || | || | |
Sbjct 68659 TTGAATCTTGGACTTGACGTTG-TCGATGGTGTCAGAAGACTCGACTTCCAAAGTAATGG 68717
Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| |||||||||| || || || || || |||||
Sbjct 68718 TCTTACCAGTCAATGTCTTGACGAAGATTTGCAT 68751
Score = 102 bits (112), Expect = 8e-17
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| || | ||| || || || | | ||||||||||| |||||||| || |
Sbjct 68981 CCACCTCTCAGTCTCAAGACCAAGTGCAGAGTAGACTCCTTTTGGATGTTGTAATCAGAC 69040
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || || |||||||| | | | || | | |||||| ||||||||
Sbjct 69041 AGCGTTCTGCCGTCTTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCCGGAGGA 69100
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| ||| | || | || | ||| || | ||||||| ||||| |
Sbjct 69101 ATACCTTCCTTGTC-TTGAATCTTGGACTTGACGTTG-TCGATCGTGTCGGAGGACTCGA 69158
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| | || | || |||||||||| ||| || || |||||||||||
Sbjct 69159 CCTCTAAAGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 69207
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| || | ||| || || || | | ||||| ||||| |||||||| || |
Sbjct 68297 CCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCAGAC 68356
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | || || ||||| ||||||| | | || | | |||||||||||||||
Sbjct 68357 AGCGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGA 68416
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || ||||| || || || |||| ||||| | | ||||| | ||||| ||
Sbjct 68417 ATGCCCTCTTTATCCTGTATCTTACTCTTTACATTGT-CAATCGTGTCAGAAGACTCAAC 68475
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | || |||||||| |||||||| ||||||||||||||
Sbjct 68476 TTCCAAGGTTATGGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 68523
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/196 (71%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||||||||| |||||||| || || || | ||| || || |||||||| | |
Sbjct 68786 GACTCCTTTTGGATGTTGTAATCAGACAGCGTTCTGCCGTCTTCCAGCTGTTTACCAGCA 68845
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
| || | | |||||| |||||||| |||||||| ||||| ||| | || | || |
Sbjct 68846 AAAATCAACCTCTGTTGATCCGGAGGAATACCTTCCTTGTC-TTGAATCTTGGACTTGAC 68904
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| || | ||||| | ||||| ||||| | || | || ||||| |||| ||| |
Sbjct 68905 GTTG-TCGATCGTGTCAGAAGACTCGACCTCTAAGGTTATGGTCTTACCGGTCAAAGTCT 68963
Query 138599 TTACAAAAATCTGCAT 138614
| || |||||||||||
Sbjct 68964 TGACGAAAATCTGCAT 68979
Score = 87.8 bits (96), Expect = 2e-12
Identities = 139/196 (71%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||||||||||||||| ||||| || ||| | ||||| | || ||||| | |
Sbjct 68102 GACTCCTTTTGAATGTTATAGTCCGACAAAGTTCTACCATCCTCCAACTGCTTACCAGCA 68161
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
| || | | |||||||| ||||| |||||||| ||||| ||| | || | || |
Sbjct 68162 AAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTC-TTGAATCTTGGACTTGAC 68220
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| || | ||||| | ||||| ||||| | || | || ||||| |||| ||| |
Sbjct 68221 GTTG-TCGATCGTGTCAGAAGACTCGACCTCTAAGGTTATGGTCTTACCGGTCAAAGTCT 68279
Query 138599 TTACAAAAATCTGCAT 138614
| || |||||||||||
Sbjct 68280 TGACGAAAATCTGCAT 68295
>seq37
Length=384943
Score = 84.2 bits (92), Expect = 2e-11
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || || |||| | ||||||||||| ||||||||||| |
Sbjct 8935 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 8876
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | ||| || | ||| ||||| | | |||| | | |||||||| || ||
Sbjct 8875 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8816
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| ||| | || | || |||| || | ||||| | || || |
Sbjct 8815 ATACCTTCCTTGTC-TTGAATCTTAGACTTGACATTG-TCAATAGTGTCTGAAGATTCAA 8758
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| || | || | || ||||| || | ||| || || ||||| |||||
Sbjct 8757 CTTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 8709
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262108445840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |