Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01- 13] 47 sequences; 11,649,856 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq12 104 4e-17 seq29 91.5 2e-13 >seq12 Length=580751 Score = 104 bits (114), Expect = 4e-17 Identities = 292/443 (66%), Gaps = 8/443 (2%) Strand=Plus/Minus Query 203880 TTCTCAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAG 203939 |||||| ||| ||||| ||||||||||| ||||||| ||| ||||| | ||||| | Sbjct 307082 TTCTCAAATAATACATACCGGTCTTTAGACCCTTCTTCCAGCCGTAGAAATGCATACTTG 307023 Query 203940 ACAGTTTGCTCA-CGTTGGGGTCGGCCATGTGAAT--GTTCAGAGACTGGCTTTGGTCGA 203996 || || | || ||||||| || | |||| |||| ||| || |||||||| Sbjct 307022 TTAGCTTACCCATAGTTGGGGCACGCAA---GAATAAATTCAAAGAGTGAGATTGGTCGA 306966 Query 203997 TGAAAGGCGCCCGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCG 204056 || || || || || || ||||| || || || ||||| || ||||| ||||| || | Sbjct 306965 TGTAAATGGCACGGTCGGCTGCCATGTTAATGATTGTCTTTTGTGAAATTTCCCAAACAG 306906 Query 204057 TCTTGAACACGTCTCTGGTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTG 204115 | || ||| ||| | | ||| ||||||| || | | || || || || || Sbjct 306905 TTTTATACAAATCTTTCAATTCTTGTGGCACAT-TTGGTAAACCTTGAATGGAACCATTT 306847 Query 204116 TCGGCCATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGC 204175 | | || || | || | | || |||| || ||||| || || || ||| Sbjct 306846 TGTGTGATTAGATATTGCTTCATACCATCATCCCAAATACCCAAATCGACCAAATCACGC 306787 Query 204176 ACCAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTG 204235 | || || || |||| || ||||| || || || || || | || | ||| |||| Sbjct 306786 AACAAGTATGGATTGACGACTTGAAATTCACCAGATAGGACACGACGAGAATACATGTTG 306727 Query 204236 TTGGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGC 204295 || | ||||||||| |||||||| || || ||||||| ||| || || ||| Sbjct 306726 GAAGTAACTGGTTCGAAACACTCGTTGTAACCTAAGATCTGAGATGTGGATGCAGTAGGC 306667 Query 204296 ATGGGAGCCAGGAGCAGGGAGTT 204318 || || |||| | || ||||| Sbjct 306666 ATAGGTGCCATGGTCAAAGAGTT 306644 >seq29 Length=397901 Score = 91.5 bits (100), Expect = 2e-13 Identities = 311/482 (65%), Gaps = 2/482 (0%) Strand=Plus/Minus Query 159923 CACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGG 159982 || ||||||||| ||||| || ||||| | |||| ||||||||||| | | | | Sbjct 366138 CAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAAC 366079 Query 159983 CCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAG 160042 || ||||| || || | | || | ||| || |||| || || | ||| || || Sbjct 366078 CCGGGCATCATACCTCTCTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAGAAGAAA 366019 Query 160043 ATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGG 160102 | || || | || || || || || || || ||||| || |||| | ||| ||| Sbjct 366018 ACACCTTCGATGGAGGCGAAGGCGACTAGTCTTTCACCGAACAGCGCGTCTGCGTCTTGG 365959 Query 160103 GTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTA 160162 |||| || ||||||||| ||||||| || || ||| |||| |||||| Sbjct 365958 ATCCATCTAAGGGCCCATTCGGCCTTCTCGCAAATTTCTGGGATGGTGTCGATGGCGTTG 365899 Query 160163 AACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATT 160222 ||||| || ||||| ||||||||| ||| | |||| | ||||| || Sbjct 365898 AACAAGAATTCACTTTCCTTTGGATCCTTGATGTAGGTATCGATCAACAAGGAGTAGGTT 365839 Query 160223 TCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATAC 160282 || | || | |||||||| || || || || ||||||| | || ||| | | Sbjct 365838 TCGGAATGAATGTTTTCGATAGCGATTTGGAAACCGTAGAAACTCTTGGCTTCCGGGATC 365779 Query 160283 TGCACCTCCTGTGTGAACCT-TTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGC 160341 || ||||| | ||| | | |||| || || | || || | ||||||| ||| || Sbjct 365778 TGGACCTCGGTGGAGAAATTCTCGACCAAG-TTTTCGTTGACAATACCGTCGGAGGCGGC 365720 Query 160342 AAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCA 160401 ||||| || | || |||||||| || |||| || ||| | ||| || | ||| Sbjct 365719 GAAGAAGGCAAGGACTCTTGAGATGAAGAACCTTTCGTTTTCGTTCATTCTGTTGTTCCA 365660 Query 160402 GT 160403 || Sbjct 365659 GT 365658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154732846320