Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01- 13] 47 sequences; 11,649,856 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq35 140 8e-28 seq37 118 2e-21 >seq35 Length=393679 Score = 140 bits (154), Expect = 8e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| ||| | ||| ||||| ||||| ||||||| |||||| |||| || || || Sbjct 68306 AGTCTCAAGACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCAGACAGCGTTCTA 68365 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||||||||| ||||| ||||| || || | | ||| ||||||||| ||| || ||| Sbjct 68366 CCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGAATGCCCTCT 68425 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||| ||||| ||| || || | ||||| | | || || ||||| || Sbjct 68426 TTATCCTGTATCTTACTCTTTACATTGTCAATCGTGTCAGAAGACTCAACTTCCAAGGTT 68485 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || |||||||| |||||||| || Sbjct 68486 ATGGTCTTACCAGTTAGAGTTTTGACAAAAATCTG 68520 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| ||| | ||| ||||| ||||||||||||| |||||| |||| || || || Sbjct 68990 AGTCTCAAGACCAAGTGCAGAGTAGACTCCTTTTGGATGTTGTAATCAGACAGCGTTCTG 69049 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 || ||||||||||| || || || || || | | ||| || |||||| ||| ||||| Sbjct 69050 CCGTCTTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCCGGAGGAATACCTTCC 69109 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || |||||||| ||| ||| |||| ||||| | | || || || || || Sbjct 69110 TTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTCTAAAGTA 69169 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || | ||| || || ||||| || Sbjct 69170 ATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTG 69204 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| ||||| | ||| ||||| ||||||||||| | ||| ||||| | |||||| || Sbjct 68078 AGTCTTAGGACCAAGTGCAGAGTGGACTCCTTTTGAATGTTATAGTCCGACAAAGTTCTA 68137 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||| |||| |||||| || || || || | | || ||||| ||| ||| ||||| Sbjct 68138 CCATCCTCCAACTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCC 68197 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || |||||||| ||| ||| |||| ||||| | | || || || || || Sbjct 68198 TTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCAGAAGACTCGACCTCTAAGGTT 68257 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || | ||| || || ||||| || Sbjct 68258 ATGGTCTTACCGGTCAAAGTCTTGACGAAAATCTG 68292 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| | ||| | ||| ||||| ||||||||||||| |||||| |||| || || || Sbjct 68762 AGTCTTAAGACCAAGTGCAGAGTAGACTCCTTTTGGATGTTGTAATCAGACAGCGTTCTG 68821 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 || ||||||||||| || || || || || | | ||| || |||||| ||| ||||| Sbjct 68822 CCGTCTTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCCGGAGGAATACCTTCC 68881 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || |||||||| ||| ||| |||| ||||| | | || || || || || Sbjct 68882 TTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCAGAAGACTCGACCTCTAAGGTT 68941 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || | ||| || || ||||| || Sbjct 68942 ATGGTCTTACCGGTCAAAGTCTTGACGAAAATCTG 68976 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| | || | ||| || || ||||||||||| | ||| ||||| | |||||| || Sbjct 68534 AGTCTTAAAACTAAGTGAAGGGTAGACTCCTTTTGAATGTTATAGTCTGACAAAGTTCTA 68593 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||| ||||| ||||| || || || || || | || ||||| ||| || ||||| Sbjct 68594 CCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGGATACCTTCC 68653 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || |||||||| ||| ||| |||| |||||| | | || || ||||| || Sbjct 68654 TTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGACTTCCAAAGTA 68713 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || | || || || || ||||| Sbjct 68714 ATGGTCTTACCAGTCAATGTCTTGACGAAGATTTG 68748 Score = 89.7 bits (98), Expect = 1e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 || || ||||| ||||| |||||||||| || || || | ||||||||| |||| ||| Sbjct 68394 ATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACGCTGTCTGATTACAACATCCAAAAA 68335 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACT 201026 ||||||||||||||| | || |||||||| Sbjct 68334 GAGTCTACTCTTCACTTGGTCTTGAGACT 68306 >seq37 Length=384943 Score = 118 bits (130), Expect = 2e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||| | ||| ||||||||||||| ||||||||||| |||||| || || Sbjct 8924 TCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCC 8865 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||||| ||||| || || ||||| | | || ||||| || ||| ||||| Sbjct 8864 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 8805 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || |||||||| ||| || || | ||||||| | ||| || || | || || Sbjct 8804 GTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAACTTCAAGGGTAAT 8745 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || | ||| || || |||||||| Sbjct 8744 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTG 8712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178920890068149