Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01- 13] 47 sequences; 11,649,856 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq37 104 2e-17 seq35 104 2e-17 seq34 84.2 2e-11 seq27 84.2 2e-11 >seq37 Length=384943 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || |||||||| || || || || ||||| ||||| || |||||| ||| ||| || Sbjct 8706 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 8765 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 ||||| || | | | || ||||| || || ||||| || || | || || Sbjct 8766 TCAGACACTATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGAC 8825 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 ||||| ||| | |||||||| || || ||||||||||| | |||| || | || || Sbjct 8826 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTAC 8885 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||| ||||| || || ||| | ||| |||| || ||||| |||| || Sbjct 8886 AACATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGG 8935 >seq35 Length=393679 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || || ||||| || ||||| |||||||| ||| || |||| Sbjct 68751 ATGCAAATCTTCGTCAAGACATTGACTGGTAAGACCATTACTTTGGAAGTCGAGTCTTCT 68692 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | ||||| || || ||||| || || | || ||| ||| Sbjct 68691 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATCCCTCCAGACCAA 68632 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || ||||| || ||||| || || ||| |||| ||| || |||| || | || |||||| Sbjct 68631 CAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAACTTTGTCAGACTATAAC 68572 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||||||| || ||||| || ||| | || |||||| | |||| || || Sbjct 68571 ATTCAAAAGGAGTCTACCCTTCACTTAGTTTTAAGACTGAGAGGTGGTAT 68522 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || || || || || || || ||||| ||||| ||| || || |||| Sbjct 68295 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 68236 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || ||| | | | | ||||| || || ||||| || || | || ||| ||| Sbjct 68235 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 68176 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || ||| | || ||||| || || || ||||| ||| || |||| || | || |||||| Sbjct 68175 CAAAGATTGATTTTTGCTGGTAAGCAGTTGGAGGATGGTAGAACTTTGTCGGACTATAAC 68116 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 |||||||| || || ||||||||| |||| ||||| || |||| || Sbjct 68115 ATTCAAAAGGAGTCCACTCTGCACTTGGTCCTAAGACTAAGAGGTGG 68069 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || || || || || || || ||||| ||||| ||| || || |||| Sbjct 68979 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 68920 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || ||| | | | | ||||| || || ||||| || || | || |||||| Sbjct 68919 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCGGATCAA 68860 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| | || ||||| || ||||| ||||||| | ||| || | ||||| ||| Sbjct 68859 CAGAGGTTGATTTTTGCTGGTAAACAGCTGGAAGACGGCAGAACGCTGTCTGATTACAAC 68800 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || ||||| || |||||||||||| |||| |||||| || |||| || || Sbjct 68799 ATCCAAAAGGAGTCTACTCTGCACTTGGTCTTAAGACTAAGAGGTGGTAT 68750 >seq34 Length=182383 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/224 (68%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 28563 TTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTG 28622 || || || || || || ||||| ||||| || ||| ||| |||| || || | Sbjct 150129 TTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 150070 Query 28623 GCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTT 28682 | | || |||| || || |||||||| || | || || ||||| ||| | Sbjct 150069 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 150010 Query 28683 ATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAA 28742 |||||||| || || ||||||||||| || ||| || |||| || ||||||||||| Sbjct 150009 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAG 149950 Query 28743 GAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786 ||||| ||| | || | || || ||||| |||| || || || Sbjct 149949 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGGTATCAT 149906 >seq27 Length=402821 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/224 (68%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 28563 TTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTG 28622 ||||| ||||| || || ||||| ||||| || ||| ||| |||| || || | Sbjct 49972 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 50031 Query 28623 GCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTT 28682 | | || ||||| ||| || ||||| || || | || || ||||| ||| | Sbjct 50032 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTA 50091 Query 28683 ATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAA 28742 |||||||| || || ||||||||||| || ||| || | || || || || ||||| Sbjct 50092 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAATATCCAAAAG 50151 Query 28743 GAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786 ||||| ||| | || | || || ||||| |||| || || || Sbjct 50152 GAATCCACTTTACATTTAGTTTTGAGATTGAGAGGTGGTATCAT 50195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425404556322813