Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01-
13] 47 sequences; 11,649,856 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq35 158 2e-33
seq29 149 9e-31
seq37 120 4e-22
seq34 116 5e-21
seq27 114 2e-20
>seq35
Length=393679
Score = 158 bits (174), Expect = 2e-33
Identities = 174/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | || ||||||||||| || || ||||| || |||||||| ||||
Sbjct 68751 ATGCAAATCTTCGTCAAGACATTGACTGGTAAGACCATTACTTTGGAAGTCGAGTCTTCT 68692
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||||| || || || ||||| || ||||| || |||||||| |||
Sbjct 68691 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATCCCTCCAGACCAA 68632
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|||||| |||||| ||| |||||||| || || ||| |||||||| ||||| |||||
Sbjct 68631 CAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAACTTTGTCAGACTATAAC 68572
Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| || ||| ||| | || ||||| ||||| |||||| | ||||| |||
Sbjct 68571 AT-TCAAAAGGAGTCTACCCTTCACTTAGTTTTAAGACTGAGAGGTGGT 68524
Score = 136 bits (150), Expect = 6e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | ||||| | ||||| || || || || || ||||| || ||||
Sbjct 68523 ATGCAGATTTTTGTCAAAACTCTAACTGGTAAGACCATAACCTTGGAAGTTGAGTCTTCT 68464
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| || || || | ||| ||||| |||||||| ||||| ||||| || |||
Sbjct 68463 GACACGATTGACAATGTAAAGAGTAAGATACAGGATAAAGAGGGCATTCCTCCGGACCAA 68404
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || ||||||| |||||||||||| || |||||| ||||| | || ||||| ||
Sbjct 68403 CAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACGCTGTCTGATTACAAC 68344
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| |||||| | || ||||| || || || ||| | ||||| |||
Sbjct 68343 ATCCAAAAAGAGTCTACTCTTCACTTGGTCTTGAGACTGAGAGGTGGT 68296
Score = 129 bits (142), Expect = 9e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || | || || ||||| || || || || || ||||| ||||| ||||
Sbjct 68295 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 68236
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||||| || || || ||||| || ||||| || |||||||| |||
Sbjct 68235 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 68176
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| ||| ||||||||| | || ||| |||||||| || || |||||
Sbjct 68175 CAAAGATTGATTTTTGCTGGTAAGCAGTTGGAGGATGGTAGAACTTTGTCGGACTATAAC 68116
Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049
|| || ||| ||| | || || || || || ||||| ||||||| ||
Sbjct 68115 AT-TCAAAAGGAGTCCACTCTGCACTTGGTCCTAAGACTAAGAGGTGG 68069
>seq29
Length=397901
Score = 149 bits (164), Expect = 9e-31
Identities = 372/557 (67%), Gaps = 13/557 (2%)
Strand=Plus/Minus
Query 18152 AATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAAC 18211
|| ||||| ||||| || ||||| |||||||| |||||| | || || ||||| ||
Sbjct 366144 AACAAACAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAG 366085
Query 18212 GTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAA 18271
|| ||||||||||| |||||||| || || | ||| || || || ||||| | ||
Sbjct 366084 GTCAACCCGGGCATCATACCTCTCTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAG 366025
Query 18272 AAGAATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGC-AAAACTGTATTTATT 18330
||||| | ||| || | | | ||||| || | || ||||||| | || | | | |
Sbjct 366024 AAGAAAACACCTTCGATGGAGGCGAAGGCGACTAGTCTTTCACCGAACAGCGCGTCTGCG 365965
Query 18331 GCTCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTAT 18390
|| | |||||| | | |||||||| | | || || || | || ||
Sbjct 365964 TCT-TGGATCCATCTAAGGGCCCATTCGGCCTTCTCGCAAATTTCTGGGATGGTGTCGAT 365906
Query 18391 AGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGA 18450
|| || ||||| || |||| || | ||| || || || || ||||| ||||| ||
Sbjct 365905 GGCGTTGAACAAGAATTCACTTTCCTTTGGATCCTTGATGTAGGTATCGATCAACAAGGA 365846
Query 18451 ATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATA-AAACGATCTAGCCT 18509
|| |||| ||||| ||| |||| ||||| || || |||| || |||| ||| | ||
Sbjct 365845 GTAGGTTTCGGAATGAATGTTTTCGATAGCGATTTGGAAACCGTAGAAAC--TCTTGGCT 365788
Query 18510 --CGGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTC 18567
|||||| || | |||| | | || | || ||||| || || || || ||||||||
Sbjct 365787 TCCGGGAT-CTGGACCTCGGTGGAGAAATTCTCGACCAAGTTTTCGTTGACAATACCGTC 365729
Query 18568 AGCAGATGCGAAAAATGCCAAAACATATTTA-ATGAAATGTTTTTCATTATCCTTGA--- 18623
| | ||||| || || | || | || | ||||| |||| || || || |
Sbjct 365728 GGAGGCGGCGAAGAAGGCAAGGAC-TCTTGAGATGAAGAACCTTTCGTTTTCGTTCATTC 365670
Query 18624 GATTGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATG 18683
|||||||| |||| ||||| || || | ||| | ||| || | ||||| ||||| |
Sbjct 365669 TGTTGTTCCAGTCATGGATATCCTTGGACAAATCGATTTCCTCGGCAGTCCAGAAAGAGG 365610
Query 18684 ATTCGGCCTGTTTGTAC 18700
||||| | ||||||
Sbjct 365609 CCTCGGCACGCTTGTAC 365593
>seq37
Length=384943
Score = 120 bits (132), Expect = 4e-22
Identities = 168/234 (72%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| |||||||| || | || || || || || || |||||||| | ||||| ||| |
Sbjct 8706 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 8765
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|| || | |||| || || || ||| || ||||| || ||||| || || || ||
Sbjct 8766 TCAGACACTATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGAC 8825
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||||||||||| | ||| |||||||| | ||||| ||||||||| || || ||
Sbjct 8826 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTAC 8885
Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
| | ||||||| ||| | || | || || || || ||||| ||||| ||||
Sbjct 8886 A--ACATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGGTG 8937
>seq34
Length=182383
Score = 116 bits (128), Expect = 5e-21
Identities = 157/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 155836 TTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAA 155895
|||| || |||||||| || || || || ||||||| ||| |||||| | ||| |
Sbjct 150125 TTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATTGACA 150066
Query 155896 ACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTT 155955
| || ||| || || ||||| |||||||| || || || || |||||||||||||| |
Sbjct 150065 ATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCT 150006
Query 155956 ATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA-GAG 156014
||| |||||||| | ||||| ||||| || || || || || || || ||| ||
Sbjct 150005 TTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACAT-TCAAAAGGAA 149947
Query 156015 GCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| || | |||||||| || ||||| ||||| |||
Sbjct 149946 TCCACTTTACATTTAGTCTTGAGATTGAGAGGTGGT 149911
>seq27
Length=402821
Score = 114 bits (126), Expect = 2e-20
Identities = 159/221 (72%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891
||| | ||||| |||||||| || || || || || ||||| ||| |||||| | |||
Sbjct 49972 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 50031
Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951
|| || || || || ||||| || ||||| || ||||| || |||||||||||
Sbjct 50032 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTA 50091
Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011
|| | ||| |||||||| | ||||| ||||| || || || || | |||||||||
Sbjct 50092 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACA--ATATCCAAA 50149
Query 156012 --GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| | || | |||||||| || ||||| ||||| |||
Sbjct 50150 AGGAATCCACTTTACATTTAGTTTTGAGATTGAGAGGTGGT 50190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731871570025200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |