Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01-
13] 47 sequences; 11,649,856 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq34 161 2e-34
seq27 156 8e-33
seq37 150 4e-31
seq35 149 1e-30
>seq34
Length=182383
Score = 161 bits (178), Expect = 2e-34
Identities = 173/226 (77%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATA 192357
||| ||| ||||||||||| | | || |||||||||||||| | | |||| || ||
Sbjct 149901 GTTCAATGATACCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGA-ATG 149959
Query 192358 TTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGT 192417
|| || || || || |||| | || |||||||| |||||||||||||| ||||| |||
Sbjct 149960 TTGTAGTCGGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGT 150019
Query 192418 TGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCT 192477
|| |||||||| || |||||||| ||||| || || ||| ||||| || | ||
Sbjct 150020 TGGTCAGGTGGGATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCA 150079
Query 192478 GACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAA 192523
|| ||||| ||||||||||| ||||| |||||||| || || ||||
Sbjct 150080 GAAGATTCAACTTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAA 150125
>seq27
Length=402821
Score = 156 bits (172), Expect = 8e-33
Identities = 172/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358
||| ||| ||||||||||| | | || |||||||||||||| | || || |||||
Sbjct 50200 GTTCAATGATACCACCTCTCAATCTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATAT 50141
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
| || ||||| || |||| | || |||||||| |||||||||||||||||||| ||||
Sbjct 50140 TGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTT 50081
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
| ||||| || || ||||| || ||||| || || || ||||| || | || |
Sbjct 50080 GGTCAGGAGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATGGTGTCAG 50021
Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAA 192527
| ||||| ||||| | ||| ||||| |||||||| || ||||| | |||
Sbjct 50020 AAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAA 49972
>seq37
Length=384943
Score = 150 bits (166), Expect = 4e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | || || || |||||||| | ||| || ||| || || |||||
Sbjct 8936 ACCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGA 8877
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
|| |||| | || |||||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct 8876 CAAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 8817
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| ||||| || ||||| || ||| || ||||| |||| ||||| ||||| ||
Sbjct 8816 AATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAAC 8757
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
||| || ||||| || ||||| ||||| || || | || || ||||| ||
Sbjct 8756 TTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8706
>seq35
Length=393679
Score = 149 bits (164), Expect = 1e-30
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| || | || || || || | ||||| |||||| ||| || ||||||
Sbjct 68294 ATACCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCA 68353
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | |||| |||| |||| ||| ||||| ||||| || || |||||||| || ||
Sbjct 68354 GACAGCGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGA 68413
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || |||||||| ||||| ||| | |||||||| || | || || || ||
Sbjct 68414 GGAATGCCCTCTTTATCCTGTATCTTACTCTTTACATTGTCAATCGTGTCAGAAGACTCA 68473
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| | || ||||| |||||||||| ||||| | ||| ||||||||
Sbjct 68474 ACTTCCAAGGTTATGGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 68523
Score = 127 bits (140), Expect = 4e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| || | || || || || | ||||| ||| || ||| || ||||||
Sbjct 68978 ATACCACCTCTCAGTCTCAAGACCAAGTGCAGAGTAGACTCCTTTTGGATGTTGTAATCA 69037
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | |||| | || |||| |||||||||||||| || || ||||||||||| ||
Sbjct 69038 GACAGCGTTCTGCCGTCTTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCCGGA 69097
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| || || || || || || | || || || ||
Sbjct 69098 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCGGAGGACTCG 69157
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| |||| ||||||||| |||||||| || || || | || ||||||||
Sbjct 69158 ACCTCTAAAGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 69207
Score = 125 bits (138), Expect = 1e-23
Identities = 168/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATATTATAATC 192365
||||||||||| || | ||| ||||| || | |||| || |||| || || ||||| ||
Sbjct 68522 ATACCACCTCTCAGTCTTAAAACTAAGTGAAGGGTAGACTCCTTTTGA-ATGTTATAGTC 68580
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
|| || |||| |||| |||| ||| ||||||||||| || | ||| ||||| || ||
Sbjct 68581 TGACAAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGG 68640
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
|| || ||||| || ||||| || || || || || || | || || || ||
Sbjct 68641 AGGGATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTC 68700
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| | ||||||||| |||||||| ||||| || | || || |||||
Sbjct 68701 GACTTCCAAAGTAATGGTCTTACCAGTCAATGTCTTGACGAAGATTTGCAT 68751
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| || | ||| || || || | ||||| ||| || ||| || ||||||
Sbjct 68750 ATACCACCTCTTAGTCTTAAGACCAAGTGCAGAGTAGACTCCTTTTGGATGTTGTAATCA 68809
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | |||| | || |||| |||||||||||||| || || ||||||||||| ||
Sbjct 68810 GACAGCGTTCTGCCGTCTTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCCGGA 68869
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| || || || || || || | || || || ||
Sbjct 68870 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCAGAAGACTCG 68929
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| |||| || ||||| ||||| || || || || | || ||||||||
Sbjct 68930 ACCTCTAAGGTTATGGTCTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 68979
Score = 107 bits (118), Expect = 4e-18
Identities = 170/240 (71%), Gaps = 4/240 (2%)
Strand=Plus/Plus
Query 192298 AGTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGAT 192356
|||||||| | |||||||| || | || || || || | ||| | ||| ||| || ||
Sbjct 68059 AGTTTAAT--TGCCACCTCTTAGTCTTAGGACCAAGTGCAGAGTGGACTCCTTTTGA-AT 68115
Query 192357 ATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTG 192416
||||| || || || |||| |||| ||||| || ||||||||||| || ||||| ||
Sbjct 68116 GTTATAGTCCGACAAAGTTCTACCATCCTCCAACTGCTTACCAGCAAAAATCAATCTTTG 68175
Query 192417 TTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATC 192476
||| || || || || ||||| || ||||| || || || || || || | ||
Sbjct 68176 TTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTC 68235
Query 192477 TGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || |||| || ||||| ||||| || || || || | || ||||||||
Sbjct 68236 AGAAGACTCGACCTCTAAGGTTATGGTCTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 68295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984479407158450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |