Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01- 13] 47 sequences; 11,649,856 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq34 170 3e-37 seq37 161 2e-34 seq27 150 3e-31 seq35 149 1e-30 >seq34 Length=182383 Score = 170 bits (188), Expect = 3e-37 Identities = 172/224 (77%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 || ||||||||||| | || || |||||||||||||| | || || ||| || || Sbjct 149906 ATGATACCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAG 149965 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || || || | || |||| |||||||| ||||||||||| || ||||| ||||||||| Sbjct 149966 TCGGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCA 150025 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 ||||| || |||||||| ||||| || || ||| ||||| || || || || ||| Sbjct 150026 GGTGGGATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGAT 150085 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAA 172060 || ||||||||||| ||||| |||||||| || || |||| ||| Sbjct 150086 TCAACTTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 150129 >seq37 Length=384943 Score = 161 bits (178), Expect = 2e-34 Identities = 179/239 (75%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893 ||| || ||||||||| | || || || || |||||||| | ||| || || || Sbjct 8944 TTCTTACCACCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTG 8885 Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953 || || || |||| || |||| |||||||| ||||||||||| || ||||| |||||| Sbjct 8884 TAGTCAGACAAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGG 8825 Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013 |||||||| || ||||| || ||||| || ||| || ||||| ||||| ||||| Sbjct 8824 TCAGGTGGAATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCTGAA 8765 Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||||| ||||| || ||||| || ||||| ||||| || || | ||| || ||||| || Sbjct 8764 GATTCAACTTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8706 >seq27 Length=402821 Score = 150 bits (166), Expect = 3e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 || ||||||||||| | || || |||||||||||||| | || || ||||| || Sbjct 50195 ATGATACCACCTCTCAATCTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAG 50136 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || || || | || |||| |||||||| ||||||||||| |||||||| ||||||||| Sbjct 50135 TCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCA 50076 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 || || || ||||| || ||||| || || || ||||| || || || || ||| Sbjct 50075 GGAGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATGGTGTCAGAAGAT 50016 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 172054 || ||||| | ||| ||||| |||||||| || ||||| Sbjct 50015 TCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTT 49978 >seq35 Length=393679 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| |||| ||| ||||| || | |||| ||| || ||| ||||| ||| Sbjct 68522 ATACCACCTCTCAGTCTTAAAACTAAGTGAAGGGTAGACTCCTTTTGAATGTTATAGTCT 68581 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || |||| || | || |||| ||| |||||||||||||| | ||| |||||||| || Sbjct 68582 GACAAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGA 68641 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| || || || || || || || || || || || Sbjct 68642 GGGATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCG 68701 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | ||||||||| |||||||| ||||| || | ||| || ||||| Sbjct 68702 ACTTCCAAAGTAATGGTCTTACCAGTCAATGTCTTGACGAAGATTTGCAT 68751 Score = 145 bits (160), Expect = 1e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| |||| || || || || | ||||| |||||| || || ||||| Sbjct 68294 ATACCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCA 68353 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | || |||| ||| ||||| |||||||| || ||||||||||| || Sbjct 68354 GACAGCGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGA 68413 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || |||||||| ||||| ||| | |||||||| || || || || || || Sbjct 68414 GGAATGCCCTCTTTATCCTGTATCTTACTCTTTACATTGTCAATCGTGTCAGAAGACTCA 68473 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | || ||||| |||||||||| ||||| | || |||||||| Sbjct 68474 ACTTCCAAGGTTATGGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 68523 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| |||| || || || || | ||||| ||| || || || ||||| Sbjct 68978 ATACCACCTCTCAGTCTCAAGACCAAGTGCAGAGTAGACTCCTTTTGGATGTTGTAATCA 69037 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || |||| |||| ||||||||||||||||| || |||||||| || || Sbjct 69038 GACAGCGTTCTGCCGTCTTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCCGGA 69097 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| || || || || || || || || || || || Sbjct 69098 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCGGAGGACTCG 69157 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || |||| ||||||||| |||||||| || || || | ||| |||||||| Sbjct 69158 ACCTCTAAAGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 69207 Score = 122 bits (134), Expect = 2e-22 Identities = 171/239 (72%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 171831 AGTTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATA 171890 ||||| || | |||||||| |||| || || || || | ||| | ||| || ||| Sbjct 68059 AGTTTAAT--TGCCACCTCTTAGTCTTAGGACCAAGTGCAGAGTGGACTCCTTTTGAATG 68116 Query 171891 TTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGT 171950 ||||| || || |||| || | || ||||| || |||||||||||||| ||||| ||| Sbjct 68117 TTATAGTCCGACAAAGTTCTACCATCCTCCAACTGCTTACCAGCAAAAATCAATCTTTGT 68176 Query 171951 TGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCT 172010 ||||| || || || ||||| || ||||| || || || || || || || || Sbjct 68177 TGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCA 68236 Query 172011 GACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || || |||| || ||||| ||||| || || || || | ||| |||||||| Sbjct 68237 GAAGACTCGACCTCTAAGGTTATGGTCTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 68295 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| |||| ||| || || || | ||||| ||| || || || ||||| Sbjct 68750 ATACCACCTCTTAGTCTTAAGACCAAGTGCAGAGTAGACTCCTTTTGGATGTTGTAATCA 68809 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || |||| |||| ||||||||||||||||| || |||||||| || || Sbjct 68810 GACAGCGTTCTGCCGTCTTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCCGGA 68869 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| || || || || || || || || || || || Sbjct 68870 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCAGAAGACTCG 68929 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || |||| || ||||| ||||| || || || || | ||| |||||||| Sbjct 68930 ACCTCTAAGGTTATGGTCTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 68979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135468232600