Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01- 13] 47 sequences; 11,649,856 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq35 131 1e-25 seq37 109 5e-19 seq47 84.2 2e-11 >seq35 Length=393679 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| ||||| ||||| || ||||| ||| | || ||| || Sbjct 68979 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 68920 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || || |||||| ||||| ||||| | || ||||||| Sbjct 68919 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCGGATCAA 68860 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || | |||| ||| |||||||||||||| || | |||||| || | ||||||||| Sbjct 68859 CAGAGGTTGATTTTTGCTGGTAAACAGCTGGAAGACGGCAGAACGCTGTCTGATTACAAC 68800 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || ||||| || ||||| ||||| |||| |||||||| |||| || Sbjct 68799 ATCCAAAAGGAGTCTACTCTGCACTTGGTCTTAAGACTAAGAGGTGG 68753 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| ||||| || || || |||||||| | || ||| | | Sbjct 69207 ATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACCATTACTTTAGAGGTCGAGTCCTCC 69148 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || || |||||| ||||| ||||| | || ||||||| Sbjct 69147 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCGGATCAA 69088 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || | |||| ||| |||||||||||||| || | |||||| || | ||||||||| Sbjct 69087 CAGAGGTTGATTTTTGCTGGTAAACAGCTGGAAGACGGCAGAACGCTGTCTGATTACAAC 69028 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || ||||| || ||||| ||||| |||| || |||||| |||| || Sbjct 69027 ATCCAAAAGGAGTCTACTCTGCACTTGGTCTTGAGACTGAGAGGTGG 68981 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || |||||||||||| |||| || || ||||| ||| | ||| ||| || Sbjct 68523 ATGCAGATTTTTGTCAAAACTCTAACTGGTAAGACCATAACCTTGGAAGTTGAGTCTTCT 68464 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | | ||||| ||||| || ||||| ||| | || ||| ||| Sbjct 68463 GACACGATTGACAATGTAAAGAGTAAGATACAGGATAAAGAGGGCATTCCTCCGGACCAA 68404 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || | |||| ||| ||||| || ||||| |||| ||||| || | ||||||||| Sbjct 68403 CAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACGCTGTCTGATTACAAC 68344 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || |||||||| ||||| | ||| |||| || |||||| |||| || Sbjct 68343 ATCCAAAAAGAGTCTACTCTTCACTTGGTCTTGAGACTGAGAGGTGG 68297 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || ||||| || || || || || |||||||| | ||| ||| || Sbjct 68751 ATGCAAATCTTCGTCAAGACATTGACTGGTAAGACCATTACTTTGGAAGTCGAGTCTTCT 68692 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || || |||||| ||||| ||||| | || || ||| Sbjct 68691 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATCCCTCCAGACCAA 68632 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||||| |||| ||| ||||| || |||||||||| ||||| || | || || ||| Sbjct 68631 CAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAACTTTGTCAGACTATAAC 68572 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| || ||||| | ||| | || ||||||||| |||| || Sbjct 68571 ATTCAAAAGGAGTCTACCCTTCACTTAGTTTTAAGACTGAGAGGTGG 68525 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| ||||| ||||| || ||||| ||| | || ||| || Sbjct 68295 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 68236 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || || |||||| ||||| ||||| | || || ||| Sbjct 68235 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 68176 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||| | |||| ||| ||||| ||| ||||||||| ||||| || |||| || ||| Sbjct 68175 CAAAGATTGATTTTTGCTGGTAAGCAGTTGGAGGATGGTAGAACTTTGTCGGACTATAAC 68116 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAA 110502 |||||||| || || || ||||| |||| ||||||| |||| || || Sbjct 68115 ATTCAAAAGGAGTCCACTCTGCACTTGGTCCTAAGACTAAGAGGTGGCAA 68066 >seq37 Length=384943 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 || |||||||| || ||||| ||||||||||| || || |||||| | ||| || || Sbjct 8706 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 8765 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 || ||| | | | | || || |||||| ||||| ||||| | || || Sbjct 8766 TCAGACACTATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGAC 8825 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 ||||||||| | || | ||| ||||| || |||| || | |||||| || | || ||| Sbjct 8826 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTAC 8885 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| ||||| || || || || ||| |||| || ||| || |||| || Sbjct 8886 AACATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGG 8935 >seq47 Length=903844 Score = 84.2 bits (92), Expect = 2e-11 Identities = 204/301 (68%), Gaps = 16/301 (5%) Strand=Plus/Minus Query 34312 ATGAGCTCAGTCTCCGGGTTGTCACA--TTCCGGACACAACACAAACTTGCGGATGAAAC 34369 |||| ||| || || || || | ||| |||| ||| | |||||| || |||||| | Sbjct 637480 ATGATCTCGGTTTCTGGATTCTTACAACTTCC--ACAAAGAACAAACCTGTTGATGAACC 637423 Query 34370 CATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGT 34429 |||| | || ||| || |||||| | | ||||| ||||| || | | || || | Sbjct 637422 CATCCAACACGTCTTGCAACTTAGCAGGTTCGTGAACACCGTTAACCAAATAACGATCTT 637363 Query 34430 TTTTGT----AATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCG-G 34484 | | | ||| || ||||| || ||||| ||| | ||||||||| ||| || Sbjct 637362 TGTCGACGGAAATAGAA----GTTTGAGCACCCAGTTCGAAACCGAAGTAC-TTGACGAT 637308 Query 34485 GTAAATGGCCGGAC-GTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCT 34543 ||| || || | || ||| ||| | |||||| || | || ||| | || | || | Sbjct 637307 GTATGGAGCAGGTCTGTTCAA-CGCATGGGCGATGTCAGCCACGTTCAGAATTGCTGTTT 637249 Query 34544 TGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGA 34603 |||| ||||| || | ||||| |||||||| ||| | |||||||| || ||||||| Sbjct 637248 TGATACCGTTACCTCTACCTTCCACCTTGGCCTGGATTGGAGGCATTTTATAACGGTAGA 637189 Query 34604 A 34604 | Sbjct 637188 A 637188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841363519171