Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01- 13] 47 sequences; 11,649,856 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq34 136 3e-27 seq37 122 7e-23 seq35 116 3e-21 >seq34 Length=182383 Score = 136 bits (150), Expect = 3e-27 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || || ||||| | |||||||| ||||||||||| || || | Sbjct 149912 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 149971 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | | || || | ||| || |||||| | ||||||||||| || || || || Sbjct 149972 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 150031 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| ||||||||||| ||| || | ||||||| | || | ||||||||| ||| || Sbjct 150032 ATACCTTCTTTGTCTTG-AATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAAC 150090 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777 ||| ||||| || || || ||||| || || ||||| || Sbjct 150091 TTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 150129 >seq37 Length=384943 Score = 122 bits (134), Expect = 7e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| || | ||||| || ||||| ||||| || || | Sbjct 8935 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 8876 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | || || | ||| || |||||| | ||||||||||| || || || ||| Sbjct 8875 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8816 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || |||||||| ||| || | |||||| | || | |||||| ||| ||| || Sbjct 8815 ATACCTTCCTTGTCTTG-AATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAAC 8757 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 |||||| || ||||| || || ||||| || || || || || ||||| || Sbjct 8756 TTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8706 >seq35 Length=393679 Score = 116 bits (128), Expect = 3e-21 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || ||||| || || ||||| || |||||||||||||| |||| | || | | ||| Sbjct 68084 AGGACCAAGTGCAGAGTGGACTCCTTTTGAATGTTATAGTCCGACAAAGTTCTACCATCC 68143 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | || || |||||| | ||||||||||| || || || |||||||| || |||||| Sbjct 68144 TCCAACTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCT 68203 Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || ||| || | ||||| | || | ||||||||| || || || | ||||| || Sbjct 68204 TG-AATCTTGGACTTGACGTTGTCGATCGTGTCAGAAGACTCGACCTCTAAGGTTATGGT 68262 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || || || |||||||| Sbjct 68263 CTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 68295 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || || ||||| || || || |||||||||||||| || | | || | | ||| || Sbjct 68543 ACTAAGTGAAGGGTAGACTCCTTTTGAATGTTATAGTCTGACAAAGTTCTACCATCCTCC 68602 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 ||||| || |||||| | |||| |||||| || || || || ||||| || |||||||| Sbjct 68603 AGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGGATACCTTCCTTGTCTTG- 68661 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| || | ||||| | || | ||||||||| || ||||| | ||| || || || Sbjct 68662 AATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGACTTCCAAAGTAATGGTCTT 68721 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || || || || ||||| Sbjct 68722 ACCAGTCAATGTCTTGACGAAGATTTGCAT 68751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385218979341627