Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01- 13] 47 sequences; 11,649,856 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq35 136 9e-27 seq27 120 7e-22 seq37 104 6e-17 seq34 98.7 2e-15 >seq35 Length=393679 Score = 136 bits (150), Expect = 9e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| |||||| || || || || || || || |||||||| || ||||||| Sbjct 68520 CAGATTTTTGTCAAAACTCTAACTGGTAAGACCATAACCTTGGAAGTTGAGTCTTCTGAC 68461 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || |||||| ||||| || || ||||| || ||| |||||| || Sbjct 68460 ACGATTGACAATGTAAAGAGTAAGATACAGGATAAAGAGGGCATTCCTCCGGACCAACAG 68401 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | || || ||||| ||||| |||||||||| || || || | ||||||||| || Sbjct 68400 AGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACGCTGTCTGATTACAACATC 68341 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 || |||||||||||||||||| | || |||||||| Sbjct 68340 CAAAAAGAGTCTACTCTTCACTTGGTCTTGAGACT 68306 Score = 116 bits (128), Expect = 9e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || || ||||||||||| || ||||||||| |||| || ||| Sbjct 68727 ACTGGTAAGACCATTACTTTGGAAGTCGAGTCTTCTGACACCATCGACAACGTCAAGTCC 68668 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| || || ||| |||||||| || || || || ||| Sbjct 68667 AAGATTCAAGACAAGGAAGGTATCCCTCCAGACCAACAAAGACTGATTTTTGCTGGTAAG 68608 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || |||| ||||| || |||||| | || || ||| | || || |||||||| |||||| Sbjct 68607 CAACTGGAGGATGGTAGAACTTTGTCAGACTATAACATTCAAAAGGAGTCTACCCTTCAC 68548 Query 206374 CTTGTTTTGAGACT 206387 | ||||| ||||| Sbjct 68547 TTAGTTTTAAGACT 68534 Score = 100 bits (110), Expect = 7e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || || || || || || || || || ||||||| Sbjct 68292 CAGATTTTCGTCAAGACTTTGACCGGTAAGACCATAACCTTAGAGGTCGAGTCTTCTGAC 68233 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||||| || ||||| ||| || ||| ||| Sbjct 68232 ACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAA 68173 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | || || || || ||||||||||| ||||| || |||||| | || || ||| | Sbjct 68172 AGATTGATTTTTGCTGGTAAGCAGTTGGAGGATGGTAGAACTTTGTCGGACTATAACATT 68113 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 || || ||||| ||||| ||| | || | ||||| Sbjct 68112 CAAAAGGAGTCCACTCTGCACTTGGTCCTAAGACT 68078 Score = 95.1 bits (104), Expect = 3e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || || || || || || || || || ||||||| Sbjct 68976 CAGATTTTCGTCAAGACTTTGACCGGTAAGACCATAACCTTAGAGGTCGAGTCTTCTGAC 68917 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||||| || ||||| ||| ||||| || Sbjct 68916 ACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCGGATCAACAG 68857 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | || || || || || ||| ||||||| || || || || | ||||||||| || Sbjct 68856 AGGTTGATTTTTGCTGGTAAACAGCTGGAAGACGGCAGAACGCTGTCTGATTACAACATC 68797 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 || || ||||||||||| ||| | || || ||||| Sbjct 68796 CAAAAGGAGTCTACTCTGCACTTGGTCTTAAGACT 68762 Score = 95.1 bits (104), Expect = 3e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || || || || ||||| || || || || ||| Sbjct 69204 CAGATTTTCGTCAAGACTTTGACTGGTAAGACCATTACTTTAGAGGTCGAGTCCTCCGAC 69145 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||||| || ||||| ||| ||||| || Sbjct 69144 ACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCGGATCAACAG 69085 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | || || || || || ||| ||||||| || || || || | ||||||||| || Sbjct 69084 AGGTTGATTTTTGCTGGTAAACAGCTGGAAGACGGCAGAACGCTGTCTGATTACAACATC 69025 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 || || ||||||||||| ||| | || |||||||| Sbjct 69024 CAAAAGGAGTCTACTCTGCACTTGGTCTTGAGACT 68990 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814 |||||||| || | |||||||||||||||||| |||| || || |||| || || || Sbjct 68306 AGTCTCAAGACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCAGACAGCGTTCTA 68365 Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||||||||| ||||| ||||| || || | || ||||| Sbjct 68366 CCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTG 68406 >seq27 Length=402821 Score = 120 bits (132), Expect = 7e-22 Identities = 152/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| |||||| | || || || || |||||||||||||| ||| ||||||||| | Sbjct 49971 TTTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCAT 50030 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 || || ||| |||||||||||| || ||||| || || ||| |||||| | Sbjct 50031 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATT 50090 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 ||||| || || ||||| |||||||| || || || ||| | || ||||| |||| || Sbjct 50091 AATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAATATCCAAAA 50150 Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || || ||| | || | ||||||||| Sbjct 50151 GGAATCCACTTTACATTTAGTTTTGAGA 50178 >seq37 Length=384943 Score = 104 bits (114), Expect = 6e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || || || | ||||| ||| ||| ||||| | || || ||| Sbjct 8733 ACCGGTAAGACTATTACCCTTGAAGTTGAATCTTCAGACACTATTGACAATGTCAAGTCT 8792 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| ||| || ||| |||||| | ||||| || || ||| Sbjct 8793 AAGATTCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 8852 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || |||||||| || || |||||| | || |||||| |||| || ||||| ||| | ||| Sbjct 8853 CAATTGGAAGACGGCAGAACTTTGTCTGACTACAACATCCAAAAGGAGTCCACTTTACAC 8912 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 8913 TTGGTCTTGAGA 8924 >seq34 Length=182383 Score = 98.7 bits (108), Expect = 2e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||| | ||||| ||| ||||||||| | || || || Sbjct 150114 ACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATTGACAATGTCAAATCC 150055 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| |||||||| || || ||| |||||| | ||||| || || ||| Sbjct 150054 AAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 149995 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || |||||||| || || || ||| |||| |||||| | || || || || ||| | || Sbjct 149994 CAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAGGAATCCACTTTACAT 149935 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 149934 TTAGTCTTGAGA 149923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820088322287