Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01- 13] 47 sequences; 11,649,856 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq12 174 2e-38 seq11 102 1e-16 >seq12 Length=580751 Score = 174 bits (192), Expect = 2e-38 Identities = 872/1371 (64%), Gaps = 36/1371 (3%) Strand=Plus/Minus Query 118181 ATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGA 118240 ||| || |||| || ||| || || ||||| |||| ||| ||||| || | |||||| Sbjct 306736 ATACATGTTGGAAGTAACTGGTTCGAAACACTCGTTGTAACCTAAGATCTGAGATGTGGA 306677 Query 118241 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTC 118300 || || ||||| ||||||||| | ||| | | ||| | ||| | ||| | Sbjct 306676 TGCAGTAGGCATAGGTGCCATGGTCAAAGAGTTTCTAATACCATGCTCCATGATGTTATT 306617 Query 118301 CTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAG 118360 | |||| |||||| || | | | || | | |||||| || || || || Sbjct 306616 TCTCAGAGTGTCCCAATCCCACATACCGTATGGTTTTTGGTCCCACATGTCGAATTGAAG 306557 Query 118361 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 118420 |||||||| || || || || || | ||| || || |||||||| || | || || Sbjct 306556 TATACCTTGAGAAGCCGGGGAGCCTTTAAAGGTTTCGTATGGGCCATCTCTTTGAGCTAA 306497 Query 118421 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATT-- 118478 ||| | || || | || || || || || ||||| || || || ||| | | Sbjct 306496 TTCACAAGAAGCTTCCATGGAGGCATGGTAGATAGTTTCGAAGATTTGAATATTTAGTAA 306437 Query 118479 GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCT 118538 || | || || || || || || | | || |||| || || || || | |||| Sbjct 306436 GCGT--GCTTCTTCTGAGTCGAATGGCAAACGCAACAACATGAAAGTGTCAGCCAAACCT 306379 Query 118539 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGA 118598 |||||||| | |||| || | ||||||||||||||| | | || ||| || ||| Sbjct 306378 TGGACACCCAAAGCAATCGGCCTATGTCTCATATTAGATCTTCTTGCTTCCTCGACAGGA 306319 Query 118599 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 118658 ||| | || | || ||||| | |||| || || | ||| || | |||||||| Sbjct 306318 TAATAGTTACGGTCAATAACGTTGTTTAAGTTACGAGTAATAACTTTAGAAATTTCATGT 306259 Query 118659 AGCTTTTCGTAATCAAAACTGCGAGTCT------CTTCA----TTGACATACTTA--GGA 118706 ||||||| | | | | | ||| | ||||| || ||| | || Sbjct 306258 AGCTTTTTGAAGTTGTATGTAGAAGTTTTGCCGTCTTCAGATGTTTCAATAAATGCTGGC 306199 Query 118707 AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 118766 | || | || |||| ||||| |||| |||||||| | ||| ||| || | |||| Sbjct 306198 AAAGCAACAGAAGCCAAGTTACAAACAGCAGTCTCATCTGGAGCAGAGTATTCAACAATT 306139 Query 118767 TCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 118826 || |||||| || || ||| || |||||||||||||| || || || ||||| Sbjct 306138 TCACAGCACAAATTAGATGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCTGTTA 306079 Query 118827 CACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 118886 || ||||||||||||| | |||| || || || |||||||| | | | |||| Sbjct 306078 CAAGCATCCTTGTAAACAACAAATGGTGTACCAGTTTCCGTTTGTGCTTCCAAGATAGAG 306019 Query 118887 TTCCAGA---CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTT 118943 | ||| | | ||| || | | ||| || | || || |||| ||||| Sbjct 306018 TACCATAATTTTTGGGC--CTTG-ATAGT---CTTACCACGACCTTCTTTTTCGTAACGG 305965 Query 118944 GTGTAGAGGGCTTCAAACTCTTCACC--CACGGCCTCTGAGAGCCCTGGTGCCTTATCT- 119000 || || |||||||| || || ||||| || | | || | || ||||| | | || | Sbjct 305964 GTATATAGGGCTTCGAATTCATCACCGTAACAGTCACTCA-AG-CCTGG-GGCAGATGTA 305908 Query 119001 GGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATC 119060 || |||| | || ||| || || || || ||||||||||| || ||||| | | Sbjct 305907 GGAGAGAATAAAGTCCAAGTGCCGTTTTCTTCGACACGCTTCATGAAAAGATCTGGAACC 305848 Query 119061 CAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 119120 || || || | ||| | ||| | || |||||| | || ||||| | | Sbjct 305847 CATAGAGCTGGGAATAAATCTCTTGCACGGATTTCTTCCTTACCGTGATTCTTTCTAATG 305788 Query 119121 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTT 119179 || | ||||| | |||||| |||||||| || |||| || | || | | ||| | Sbjct 305787 TCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGGGCAAAGGCACCAGGT 305728 Query 119180 ACGACG--ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGA 119237 | |||| | |||| ||||| | ||||| ||| || ||||| | ||| ||| Sbjct 305727 CTCTTGTTACCACCTTGGTCAACATAACGGGCAGTATTGTTGAAGACACGGATCATAGGA 305668 Query 119238 ATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCG 119297 || | || | || || ||||| || ||| ||| | || | | | | Sbjct 305667 ATTAACCCGTTAGAAGTCCCGTTTGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTG 305608 Query 119298 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTG 119357 ||||| || | ||||||||| || || || || || || || ||| | | | | Sbjct 305607 TGGATATGTAGACCAATACCTCCAGCAGTTTTAGAAATCAAAGCACATTCCTTCAAAGTA 305548 Query 119358 CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGA 119417 |||| || || || || || ||| |||| |||| | | ||| ||| ||||||||| Sbjct 305547 TCGTAAATACCTTCAATGGAATCATCCTTCATTGCAACTAAGAAACAGGAGGACATTTGA 305488 Query 119418 GGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTT-GGGA 119476 ||| | || |||||||||||||| | |||||| | || | || || || || | || Sbjct 305487 GGCTTTGGAGTACCAGCGTTGAATAAAGTTGGAGAGGCAT-GAGTAAAGTATTTTAGAGA 305429 Query 119477 CATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACC 119527 ||| || ||||| || || |||| ||||| ||| ||||||||||| Sbjct 305428 CATTAAGTTATAGGTTTCTAAAGCGGCCTCAATGTTTTCACCGTGAATACC 305378 >seq11 Length=608272 Score = 102 bits (112), Expect = 1e-16 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 167948 CTACGGTCGCGTGGCGCCAAGATCTGGACTCGCTGTGAAGAGTGGTATCCAAGTTGGTGC 168007 ||||||| | | ||||||||||| || || || ||||| | ||||| ||| |||||| Sbjct 518375 CTACGGTAGGATTGCGCCAAGATCAGGCCTAGCAGTGAAAAACGGTATTCAAACTGGTGC 518434 Query 168008 GGGTGTTGTTGATCCAGACTATACGGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGGCA 168067 |||||||| || |||||| || |||||||| || || || | |||||||| ||| Sbjct 518435 TGGTGTTGTCGACAGAGACTACACTGGTGAAGTTAAGGTTATTTTATTCAATCATTCGCA 518494 Query 168068 CACAGATTTCCAAATCAAAAAGGGGGATCGCATCGCGCAACTCATCTTAGA 168118 | |||||| ||||| || || ||||| | || ||| | ||||| || Sbjct 518495 GAAGGATTTCGCGATCAAGAAAGGTGATCGTGTTGCCCAATTGATCTTGGA 518545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434836669320