Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01-
13] 47 sequences; 11,649,856 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq35 152 6e-32
seq27 134 2e-26
seq37 132 5e-26
seq34 113 5e-20
seq12 93.3 5e-14
>seq35
Length=393679
Score = 152 bits (168), Expect = 6e-32
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| | || || ||||| |||||| | || || ||||| |
Sbjct 68751 ATGCAAATCTTCGTCAAGACATTGACTGGTAAGACCATTACTTTGGAAGTCGAGTCTTCT 68692
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| | || ||||| |||||||| || || |||||||||||
Sbjct 68691 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATCCCTCCAGACCAA 68632
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || |||||||||||||||||||| ||||||| | | || | ||||||||||
Sbjct 68631 CAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAACTTTGTCAGACTATAAC 68572
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617
| |||||||| || || ||||| |||| ||
Sbjct 68571 ATTCAAAAGGAGTCTACCCTTCACTTAGTTTT 68540
Score = 134 bits (148), Expect = 2e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || |||||||| || || || || ||||| || || | || |||||||| |
Sbjct 68523 ATGCAGATTTTTGTCAAAACTCTAACTGGTAAGACCATAACCTTGGAAGTTGAGTCTTCT 68464
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | ||| ||| || ||||| || ||||| |||||||| |||||
Sbjct 68463 GACACGATTGACAATGTAAAGAGTAAGATACAGGATAAAGAGGGCATTCCTCCGGACCAA 68404
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | |||||||| ||||||||||| || |||| | | || || | || || ||
Sbjct 68403 CAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACGCTGTCTGATTACAAC 68344
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||||||| || || |||||||| | |||||| | || | |||||
Sbjct 68343 ATCCAAAAAGAGTCTACTCTTCACTTGGTCTTGAGACTGAGAGGTGG 68297
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| | ||||| ||||| || || | ||||| ||||| |
Sbjct 68295 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 68236
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | || ||||| |||||||| || ||||||||||||||
Sbjct 68235 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 68176
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | ||||||||||||||||| | ||||||| | | || | | ||||||||
Sbjct 68175 CAAAGATTGATTTTTGCTGGTAAGCAGTTGGAGGATGGTAGAACTTTGTCGGACTATAAC 68116
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
| |||||||| |||||||| ||
Sbjct 68115 ATTCAAAAGGAGTCCACTCTGCA 68093
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| | || || ||||| |||||| | ||||| |||||
Sbjct 69207 ATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACCATTACTTTAGAGGTCGAGTCCTCC 69148
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | || ||||| |||||||| || |||||||| || ||
Sbjct 69147 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCGGATCAA 69088
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | |||||||||||||| || || || || | | || || | || || ||
Sbjct 69087 CAGAGGTTGATTTTTGCTGGTAAACAGCTGGAAGACGGCAGAACGCTGTCTGATTACAAC 69028
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||||| || ||||| || | |||||| | || | |||||
Sbjct 69027 ATCCAAAAGGAGTCTACTCTGCACTTGGTCTTGAGACTGAGAGGTGG 68981
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| | ||||| ||||| || || | ||||| ||||| |
Sbjct 68979 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 68920
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | || ||||| |||||||| || |||||||| || ||
Sbjct 68919 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCGGATCAA 68860
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | |||||||||||||| || || || || | | || || | || || ||
Sbjct 68859 CAGAGGTTGATTTTTGCTGGTAAACAGCTGGAAGACGGCAGAACGCTGTCTGATTACAAC 68800
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617
|||||||||| || ||||| || | |||||
Sbjct 68799 ATCCAAAAGGAGTCTACTCTGCACTTGGTCTT 68768
>seq27
Length=402821
Score = 134 bits (148), Expect = 2e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|||||||| || | || || ||||| || ||| | || ||||| || ||| | ||||
Sbjct 49972 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 50031
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || ||||| |||||||| || || ||||| ||||| || | ||
Sbjct 50032 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTA 50091
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| ||||||||||||||| | || || | | | ||| | | ||||| ||| ||||||||
Sbjct 50092 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAATATCCAAAAG 50151
Query 27595 GAATCCACTCTTCATCTAGTCTTG 27618
||||||||| | ||| |||| |||
Sbjct 50152 GAATCCACTTTACATTTAGTTTTG 50175
Score = 123 bits (136), Expect = 3e-23
Identities = 288/432 (67%), Gaps = 17/432 (4%)
Strand=Plus/Plus
Query 81313 TCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC---- 81368
|||| |||||| | |||||| |||||||||||||||| | | ||| | | ||
Sbjct 215569 TCGACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAAAAGGGCAAAGGCACCGGGT 215628
Query 81369 --CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATA 81426
|||| || |||| |||| |||||||| ||||| ||| || ||||| | |||
Sbjct 215629 CTCTTGTTAC---CACCTTGGTCCACGTAACGTGCAGTGTTGTTGAAGACACGGATCATG 215685
Query 81427 GGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACC 81486
|| || | || | ||| |||||| ||||| | ||| || || ||| || |
Sbjct 215686 GGAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGTGGAACGAATA 215745
Query 81487 TTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATG 81546
||| |||| |||||| | ||||||| ||| |||||| |||||| ||||
Sbjct 215746 TTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAA 215805
Query 81547 GTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATC 81606
|| || ||||| || || ||| || | |||||| ||| || |||||| |||||
Sbjct 215806 GTGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATT 215865
Query 81607 TGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTT 81666
||||| | | |||||||| || ||||| |||| ||||| |||| || |
Sbjct 215866 TGAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGGAAGCGTGGGTGAAGTATCTCAAC 215925
Query 81667 GACATCAGGTCATAGGTTTCCTTGACGCGTGGA----ATATCGTCACCGTGAATACCGAT 81722
||||||| || || || ||| | || ||| |||||| ||||||||||| |
Sbjct 215926 GACATCAAGTTGTAAGT---CTTCA-GCACGGACTCGATATCGCTGCCGTGAATACCTAG 215981
Query 81723 AGCTACACGCAT 81734
|| ||||||||
Sbjct 215982 GGCCACACGCAT 215993
Score = 82.4 bits (90), Expect = 9e-11
Identities = 112/154 (73%), Gaps = 2/154 (1%)
Strand=Plus/Plus
Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007
||||||||||||| ||||| || || || || || ||||||||||||| ||||| |
Sbjct 215207 ACTCGACGATTTCGCAACACAAGTTTGACGATTTGATGGTACCCAGGTTTTGTTGGTTGG 215266
Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067
||| ||| || || ||||| || |||| | || |||||||| || |||| ||
Sbjct 215267 TCTTTCTGTTACAGGCATCCTTATAAACCATGAAGGGTGTACCGGTTTCTGTTTGTG-CT 215325
Query 81068 TG-AGGATGGCGTCCCAAATCTCGCGCGCCTTGA 81100
|| | |||||||| ||| | || | |||||||
Sbjct 215326 TGCAAGATGGCGTACCATACCTTTTGAGCCTTGA 215359
>seq37
Length=384943
Score = 132 bits (146), Expect = 5e-26
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| | ||||| ||||||||||| ||||| ||||| ||
Sbjct 8709 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCTTCA 8768
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | ||| |||| ||||| |||||||| || ||||| || |||||
Sbjct 8769 GACACTATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAA 8828
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||||||||||||| | || || | | || | | ||||| ||
Sbjct 8829 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTACAAC 8888
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||||||||| |||||| | || | ||||||
Sbjct 8889 ATCCAAAAGGAGTCCACTTTACACTTGGTCTTG 8921
>seq34
Length=182383
Score = 113 bits (124), Expect = 5e-20
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| || ||||| | || || ||||| || ||||| || ||||| || ||| | |||
Sbjct 150130 CTTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCAT 150071
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
|| ||| | || | || ||||| ||||| || || || || || ||||| || | |
Sbjct 150070 TGACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATT 150011
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593
|| ||||||||||||||| | || || | | | ||| | | ||||| || | |||||
Sbjct 150010 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAA 149951
Query 27594 GGAATCCACTCTTCATCTAGTCTTG 27618
|||||||||| | ||| ||||||||
Sbjct 149950 GGAATCCACTTTACATTTAGTCTTG 149926
>seq12
Length=580751
Score = 93.3 bits (102), Expect = 5e-14
Identities = 134/184 (73%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 80043 CAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAG 80102
|| ||| ||||| || ||||| || ||||||||||||||||| | |||||| | ||
Sbjct 307078 CAAATAATACATACCGGTCTTTAGACCCTTCTTCCAGCCGTAGAAATGCATACTTGTTAG 307019
Query 80103 CTT-CGCA-AGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATGAAA 80160
||| | || ||| ||||| | || ||| | |||| ||| ||||| || |||| ||
Sbjct 307018 CTTACCCATAGT-TGGGGCAC-GCAAGAATAAATTCAAAGAGTGAGATTGGTCGATGTAA 306961
Query 80161 GCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTACGA 80220
|||| || || ||||| | ||| |||| |||||||| ||||||||| || || |
Sbjct 306960 ATGGCACGGTCGGCTGCCATGTTAATGATTGTCTTTTGTGAAATTTCCCAAACAGTTTTA 306901
Query 80221 TACA 80224
||||
Sbjct 306900 TACA 306897
Score = 87.8 bits (96), Expect = 2e-12
Identities = 277/422 (66%), Gaps = 27/422 (6%)
Strand=Plus/Minus
Query 81313 TCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC---- 81368
|||| ||||| | ||| || || ||||||||||||| ||| | ||| | | ||
Sbjct 305787 TCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGGGCAAAGGCACCAGGT 305728
Query 81369 --CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATA 81426
|||| || |||| |||| || ||||||||||| ||| || ||||| | ||||
Sbjct 305727 CTCTTGTTAC---CACCTTGGTCAACATAACGGGCAGTATTGTTGAAGACACGGATCATA 305671
Query 81427 GGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACC 81486
|| || | || | || ||||| ||||| | || || || | || || |
Sbjct 305670 GGAATTAACCCGTTAGAAGTCCCGTTTGTACCAGCAATGTAAGAGCCGGTTGCACGAATG 305611
Query 81487 TTGCTGATTGAAAGACCGATGCCACCTGACCACTTT--GAAATCTGAGCACACCGGTTCA 81544
||| ||| ||||| || || || | || ||| |||||| |||||| ||||
Sbjct 305610 TTGTGGATATGTAGACCAATACCTCC--AGCAGTTTTAGAAATCAAAGCACATTCCTTCA 305553
Query 81545 TGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACA 81604
|| || ||||| || || ||| ||| | ||||| ||| ||||||||| ||||
Sbjct 305552 AAGTATCGTAAATACCTTCAATGGAATCATCCTTCATTGCAACTAAGAAACAGGAGGACA 305493
Query 81605 TCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACG 81662
| ||||| ||| ||| || || ||||| | ||||| | || ||| | || ||
Sbjct 305492 TTTGAGG--CTTTGGAGTACCAGCGTTGAATAAAGTTGGAGAGGCATGAGTAAAGTA--- 305438
Query 81663 GTTT---GACATCAGGTCATAGGTTTCCTTGACGCG--TGGAATATCGTCACCGTGAATA 81717
||| ||||| | || ||||||||| | | ||| ||| | ||||||||||||
Sbjct 305437 TTTTAGAGACATTAAGTTATAGGTTTC--TAAAGCGGCCTCAATGTTTTCACCGTGAATA 305380
Query 81718 CC 81719
||
Sbjct 305379 CC 305378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310064942640
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