Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01- 13] 47 sequences; 11,649,856 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq35 134 9e-27 seq37 105 4e-18 >seq35 Length=393679 Score = 134 bits (148), Expect = 9e-27 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || | ||| ||||| || ||||| ||| ||||| ||||| ||||| || Sbjct 68297 CCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCAGAC 68356 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| | ||||| ||||| ||||||||||| || || | |||||||||||| || Sbjct 68357 AGCGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGA 68416 Query 34600 ACTCCCTCCTTGT-CTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCAC 34658 | ||||| || | |||| ||||| |||| ||| ||||| ||| || Sbjct 68417 ATGCCCTCTTTATCCTGT-ATCTTACTCTTTACATTGTCAATCGTGTCAGAAGACTCAAC 68475 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| |||||| || ||||| |||| ||||| |||||||||||||| Sbjct 68476 TTCCAAGGTTATGGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 68523 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || | || ||||| || ||||| ||||||||| ||||| ||||| || Sbjct 68753 CCACCTCTTAGTCTTAAGACCAAGTGCAGAGTAGACTCCTTTTGGATGTTGTAATCAGAC 68812 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| ||||||| || |||||||| ||||| || || | |||||| ||||| || Sbjct 68813 AGCGTTCTGCCGTCTTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCCGGAGGA 68872 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658 | || ||||||||| ||||| | || ||| | || ||||| ||| || Sbjct 68873 ATACCTTCCTTGTCTTGAATCTTG-GACTTGACGTTGTCGATCGTGTCAGAAGACTCGAC 68931 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | |||||| || |||||||| || || || || ||||||||||| Sbjct 68932 CTCTAAGGTTATGGTCTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 68979 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || | ||| ||||| || ||||| ||||||||| ||||| ||||| || Sbjct 68981 CCACCTCTCAGTCTCAAGACCAAGTGCAGAGTAGACTCCTTTTGGATGTTGTAATCAGAC 69040 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| ||||||| || |||||||| ||||| || || | |||||| ||||| || Sbjct 69041 AGCGTTCTGCCGTCTTCCAGCTGTTTACCAGCAAAAATCAACCTCTGTTGATCCGGAGGA 69100 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658 | || ||||||||| ||||| | || ||| | || ||||| | ||| || Sbjct 69101 ATACCTTCCTTGTCTTGAATCTTG-GACTTGACGTTGTCGATCGTGTCGGAGGACTCGAC 69159 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || || ||||| || || || || || ||||||||||| Sbjct 69160 CTCTAAAGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 69207 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| ||||| || | | ||||| || |||||| |||||||||||||||||| || || Sbjct 68068 GCCACCTCTTAGTCTTAGGACCAAGTGCAGAGTGGACTCCTTTTGAATGTTATAGTCCGA 68127 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 | |||| | || || | || ||||| ||||| || || | |||||||| || || Sbjct 68128 CAAAGTTCTACCATCCTCCAACTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGG 68187 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | || ||||||||| ||| || | || ||| | || ||||| ||| | Sbjct 68188 AATACCTTCCTTGTCT-TGAATCTTGGACTTGACGTTGTCGATCGTGTCAGAAGACTCGA 68246 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | |||||| || |||||||| || || || || ||||||||||| Sbjct 68247 CCTCTAAGGTTATGGTCTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 68295 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || | || || || || || || |||||||||||||||||| ||||| Sbjct 68525 CCACCTCTCAGTCTTAAAACTAAGTGAAGGGTAGACTCCTTTTGAATGTTATAGTCTGAC 68584 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| | || || ||||| ||||| ||||| || | | |||||||| || || Sbjct 68585 AAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGG 68644 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || ||||||||| ||| || | || ||| | || ||||| ||| || Sbjct 68645 ATACCTTCCTTGTCT-TGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGAC 68703 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || ||||| || || || || || || || ||||| Sbjct 68704 TTCCAAAGTAATGGTCTTACCAGTCAATGTCTTGACGAAGATTTGCAT 68751 >seq37 Length=384943 Score = 105 bits (116), Expect = 4e-18 Identities = 164/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | ||| ||||| || | |||| ||||||||| ||||| || || || Sbjct 8935 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 8876 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| ||||||| | ||| ||||| ||||| || || | |||||||| || || Sbjct 8875 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8816 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658 | || ||||||||| ||||| | || || | ||| |||||| || || Sbjct 8815 ATACCTTCCTTGTCTTGAATCTTA-GACTTGACATTGTCAATAGTGTCTGAAGATTCAAC 8757 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 ||| | ||| || || ||||||||||| || || || ||||| ||||| ||| Sbjct 8756 TTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTG 8705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729419718951