Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01-
13] 47 sequences; 11,649,856 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq34 156 4e-33
seq37 149 5e-31
seq27 147 2e-30
seq35 141 8e-29
>seq34
Length=182383
Score = 156 bits (172), Expect = 4e-33
Identities = 167/221 (76%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
|| || || ||| |||| || ||| | || ||||| ||||| ||| | || ||| | |||
Sbjct 150129 TTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 150070
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| | |||||| || ||||||||||||||||| || ||||| || ||||| | ||
Sbjct 150069 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 150010
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | || || || |||||||||||| || ||| | ||||| |||||||||||||||
Sbjct 150009 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAG 149950
Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || |||||||| || ||| | ||| | ||||| ||
Sbjct 149949 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGGTAT 149909
>seq37
Length=384943
Score = 149 bits (164), Expect = 5e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || ||| | ||||| ||| ||||||| |||||||| ||| | ||
Sbjct 8709 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCTTCA 8768
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || ||||||||||| ||||| || ||||| || |||
Sbjct 8769 GACACTATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAA 8828
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | || || || |||||||||||| | || | || || ||||||
Sbjct 8829 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTACAAC 8888
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| ||||||||||| || ||||| ||||| ||| | ||| | |||||
Sbjct 8889 ATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGG 8935
>seq27
Length=402821
Score = 147 bits (162), Expect = 2e-30
Identities = 165/221 (75%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
||||| |||||| |||| || ||| | || ||| | ||||| ||| | || ||| | |||
Sbjct 49972 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 50031
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| | ||||| ||| ||||||||||| ||||| || || || || ||||| | |||
Sbjct 50032 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTA 50091
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | || || || |||||||||||| || ||| | || || ||||| || ||||||
Sbjct 50092 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAATATCCAAAAG 50151
Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || |||||||| |||||| | ||| | ||||| ||
Sbjct 50152 GAATCCACTTTACATTTAGTTTTGAGATTGAGAGGTGGTAT 50192
>seq35
Length=393679
Score = 141 bits (156), Expect = 8e-29
Identities = 180/248 (73%), Gaps = 0/248 (0%)
Strand=Plus/Minus
Query 26970 ttttttAATTTATACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACT 27029
|||||||| | | || | |||||||| || || || ||| |||| || ||| | ||||||
Sbjct 69225 TTTTTTAAATAAGACACTATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACCATTACT 69166
Query 27030 CTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAA 27089
| || || || | |||||| |||| || | ||||| || ||||||||||| |||
Sbjct 69165 TTAGAGGTCGAGTCCTCCGACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAA 69106
Query 27090 GGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCG 27149
|| || || || ||||||||| | || || | || || ||||| |||||||| |
Sbjct 69105 GGTATTCCTCCGGATCAACAGAGGTTGATTTTTGCTGGTAAACAGCTGGAAGACGGCAGA 69046
Query 27150 ACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGG 27209
|| | || ||||||||||| ||||||||||| || | || ||||| ||| | || |
Sbjct 69045 ACGCTGTCTGATTACAACATCCAAAAGGAGTCTACTCTGCACTTGGTCTTGAGACTGAGA 68986
Query 27210 GGTGGCAT 27217
||||| ||
Sbjct 68985 GGTGGTAT 68978
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| |||||||| || || ||| | || || | ||||| || | ||
Sbjct 68523 ATGCAGATTTTTGTCAAAACTCTAACTGGTAAGACCATAACCTTGGAAGTTGAGTCTTCT 68464
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| ||||||| | || || || || || || ||||| ||||| || || || |||
Sbjct 68463 GACACGATTGACAATGTAAAGAGTAAGATACAGGATAAAGAGGGCATTCCTCCGGACCAA 68404
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | ||||| || ||| ||||||| || || | || |||||||||
Sbjct 68403 CAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACGCTGTCTGATTACAAC 68344
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||| ||||| || | || ||||| ||| | || | ||||| ||
Sbjct 68343 ATCCAAAAAGAGTCTACTCTTCACTTGGTCTTGAGACTGAGAGGTGGTAT 68294
Score = 116 bits (128), Expect = 3e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| ||||||| ||| | || || | || || || | ||
Sbjct 68979 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 68920
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| || | ||||| || ||||||||||| ||||| || || || ||||||
Sbjct 68919 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCGGATCAA 68860
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | || || ||||| |||||||| | || | || |||||||||
Sbjct 68859 CAGAGGTTGATTTTTGCTGGTAAACAGCTGGAAGACGGCAGAACGCTGTCTGATTACAAC 68800
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199
|| ||||||||||| || | || ||||| ||
Sbjct 68799 ATCCAAAAGGAGTCTACTCTGCACTTGGTCTT 68768
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| ||||||| ||| | || || | || || || | ||
Sbjct 68295 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 68236
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| || | ||||| || ||||||||||| ||||| || || || || |||
Sbjct 68235 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 68176
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | || || || || ||||| || || || | || || || |||
Sbjct 68175 CAAAGATTGATTTTTGCTGGTAAGCAGTTGGAGGATGGTAGAACTTTGTCGGACTATAAC 68116
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196
|||||||||||||| || | || |||||
Sbjct 68115 ATTCAAAAGGAGTCCACTCTGCACTTGGT 68087
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || |||| || ||| | |||||| | ||||| || | ||
Sbjct 68751 ATGCAAATCTTCGTCAAGACATTGACTGGTAAGACCATTACTTTGGAAGTCGAGTCTTCT 68692
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || ||||||||||| ||||| || || || || |||
Sbjct 68691 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATCCCTCCAGACCAA 68632
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | | || | || || || ||| |||| || || || | || || || |||
Sbjct 68631 CAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAACTTTGTCAGACTATAAC 68572
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||||||||||| ||| | || || ||||| | || | ||||| ||
Sbjct 68571 ATTCAAAAGGAGTCTACCCTTCACTTAGTTTTAAGACTGAGAGGTGGTAT 68522
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918144485440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |