Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20eubayanus_20[genbank_20GCA_5F001515405.1_202016-01- 13] 47 sequences; 11,649,856 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq34 132 3e-26 seq27 120 2e-22 seq35 100 2e-16 >seq34 Length=182383 Score = 132 bits (146), Expect = 3e-26 Identities = 166/224 (74%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 23620 TTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTT 23679 |||||||| || | || || || || |||||||| |||||||| || | ||||| || Sbjct 150129 TTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 150070 Query 23680 GA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTT 23738 || ||| | ||| | || | || |||||||||||| | || || || ||||| | || Sbjct 150069 GACAATGTCAAATCCAAGA-TTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATT 150011 Query 23739 AATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAA 23798 || ||||| || || ||| ||||||||| | || || ||| |||||||| ||||| Sbjct 150010 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAA 149951 Query 23799 AGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG-ATCA 23841 || ||||| ||||||||||| || || ||| |||| || |||| Sbjct 149950 GGAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGGTATCA 149907 >seq27 Length=402821 Score = 120 bits (132), Expect = 2e-22 Identities = 164/225 (73%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 23619 TTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGT 23678 ||| || ||||| | || || || || |||||| | |||||||| || | ||||| | Sbjct 49971 TTTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCAT 50030 Query 23679 TGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTT 23737 ||| ||| | || |||| | || ||||| |||||| | || || || ||||| | | Sbjct 50031 TGACAATGTCAAGTCAAAGA-TTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGAT 50089 Query 23738 TAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAA 23797 |||| ||||| || || ||| ||||||||| | || || || ||||| || |||| Sbjct 50090 TAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAATATCCAAA 50149 Query 23798 AAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG-ATCA 23841 | || ||||| |||||||||||||| || ||| |||| || |||| Sbjct 50150 AGGAATCCACTTTACATTTAGTTTTGAGATTGAGAGGTGGTATCA 50194 >seq35 Length=393679 Score = 100 bits (110), Expect = 2e-16 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || ||||| || || || || || || || | |||||||| || | Sbjct 68523 ATGCAGATTTTTGTCAAAACTCTAACTGGTAAGACCATAACCTTGGAAGTTGAGTCTTCT 68464 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | |||| || || || ||||| || | || || || ||| Sbjct 68463 GACACGATTGACAATGTAAAGAGTAAGATACAGGATAAAGAGGGCATTCCTCCGGACCAA 68404 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGA----CGAACGCACTTTAGGCGATTA 23786 ||| | || || |||||||| || ||||||||||| |||||| | | ||||| Sbjct 68403 CAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACGCTGTCT----GATTA 68348 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||||| ||||||||||| || | || || || || || || |||| || Sbjct 68347 CAACATCCAAAAAGAGTCTACTCTTCACTTGGTCTTGAGACTGAGAGGTGG 68297 Score = 100 bits (110), Expect = 2e-16 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || | || || || || || ||| | || || || ||| | Sbjct 69207 ATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACCATTACTTTAGAGGTCGAGTCCTCC 69148 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || ||| ||||| |||||| | || || |||||| Sbjct 69147 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCGGATCAA 69088 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACG----AACGCACTTTAGGCGATTA 23786 ||| | || || ||||| || ||||| |||||||||| ||||| | | ||||| Sbjct 69087 CAGAGGTTGATTTTTGCTGGTAAACAGCTGGAAGACGGCAGAACGCTGTCT----GATTA 69032 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||||| ||||| ||||| || | || || || || || || |||| || Sbjct 69031 CAACATCCAAAAGGAGTCTACTCTGCACTTGGTCTTGAGACTGAGAGGTGG 68981 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/219 (69%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || | || || || || || || | || || || || | Sbjct 68979 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 68920 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || ||| ||||| |||||| | || || |||||| Sbjct 68919 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCGGATCAA 68860 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACG----AACGCACTTTAGGCGATTA 23786 ||| | || || ||||| || ||||| |||||||||| ||||| | | ||||| Sbjct 68859 CAGAGGTTGATTTTTGCTGGTAAACAGCTGGAAGACGGCAGAACGCTGTCT----GATTA 68804 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 |||||| ||||| ||||| || | || || || ||||| Sbjct 68803 CAACATCCAAAAGGAGTCTACTCTGCACTTGGTCTTAAG 68765 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || || | || || || || || ||| | ||||| || || | Sbjct 68751 ATGCAAATCTTCGTCAAGACATTGACTGGTAAGACCATTACTTTGGAAGTCGAGTCTTCT 68692 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || ||| ||||| |||||| | || ||||| ||| Sbjct 68691 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATCCCTCCAGACCAA 68632 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | | || ||||| || || |||||||| || | | ||||| || || ||| Sbjct 68631 CAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAACTTTGTCAGACTATAAC 68572 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||| ||||| || | || ||||||||||| || |||| || Sbjct 68571 ATTCAAAAGGAGTCTACCCTTCACTTAGTTTTAAGACTGAGAGGTGG 68525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009406383876