Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq14 131 4e-25
seq10 91.5 3e-13
>seq14
Length=778926
Score = 131 bits (144), Expect = 4e-25
Identities = 170/235 (72%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 319796 TGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAG 319855
||| ||||| || ||| | |||||||||||| ||| |||| | |||| ||
Sbjct 599065 TGTCAGAATGGGTGTTGTCAATATCGTGTTCCACATAAACAGTGCGACATTCATCTTGAG 599006
Query 319856 AGGGGAACCCTTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCC 319915
|||||| || || | |||||| || |||||| ||||| || || ||||| || || |
Sbjct 599005 TGGGGAAGCCGTCGACCTGGCCATTAGCAATAGATCGCATTAGAGTAGATTTTCCGGCAC 598946
Query 319916 CGTTTGGCCCACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCA 319975
| ||||| ||||| ||||| || | | || || |||| | || | || ||||| |
Sbjct 598945 CATTTGGGCCACATAGACCATATCTTCTACCTCGCTTCAACCTCAATTGAGTCTTGTTTA 598886
Query 319976 GAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030
| |||||||| |||||||||||| ||||||||||| | ||||| ||| |||||
Sbjct 598885 GCAGAATTTTGGCACCATATGCCAAGGAAAATTCACAGTTACACAAATCTTCACC 598831
>seq10
Length=743843
Score = 91.5 bits (100), Expect = 3e-13
Identities = 134/187 (72%), Gaps = 2/187 (1%)
Strand=Plus/Plus
Query 230452 GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTT 230511
|| ||||||||||| || ||| || ||| | || ||||| || ||| | |||| ||
Sbjct 391558 GGTATGAACGCTGACCTAATGAACCAATACGTTGAGTTCGTTGCTGACAGACTTTTGGTC 391617
Query 230512 GCACTTGGTTACGAGAAAGTGTACAA-CTCTAAGAACCCCTTTGCATTTATGGAGCTCAT 230570
|| ||||| || ||||| ||||| || || |||||||| | |||||||| |||
Sbjct 391618 GCCTTTGGTAACAAGAAATACTACAAGGTCGAA-AACCCCTTCGACTTTATGGAAAACAT 391676
Query 230571 TTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGG 230630
|| | || |||||||||||||| |||||| | ||| ||| || || | | ||||
Sbjct 391677 CTCCTTGGCTGGTAAGACCAACTTCTTTGAAAAGAGAGTCTCTGATTACCAAAAGGCTGG 391736
Query 230631 TGTGATG 230637
||| |||
Sbjct 391737 TGTTATG 391743
Score = 89.7 bits (98), Expect = 1e-12
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 118910 TGGGTTATTTTTGACGAAGTTCATTATATCAATGATAAATCCAGGGGTTCTGTATGGGAA 118969
|||||||||||||| ||||||||||| || | || ||| || ||| ||||||||||
Sbjct 340319 TGGGTTATTTTTGATGAAGTTCATTACATGAGAGACAAAGAAAGAGGTGTTGTATGGGAA 340378
Query 118970 GAGTCAATCATTTTGATGCCGGATACGATGCGCGCTGtttttttGTCTGCAACGGTTCCG 119029
|| |||||||||| |||| |||| | | || ||| ||||| || || || ||||
Sbjct 340379 GAAACAATCATTTTACTGCCAGATAAGGTCCGTTATGTGTTTTTATCAGCCACTATTCCA 340438
Query 119030 AACGCGGTTGAATT 119043
|| || | |||||
Sbjct 340439 AATGCAATGGAATT 340452
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823769592710
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |