Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03- 21] 17 sequences; 12,092,810 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq10 93.3 4e-14 >seq10 Length=743843 Score = 93.3 bits (102), Expect = 4e-14 Identities = 280/432 (65%), Gaps = 8/432 (2%) Strand=Plus/Minus Query 16202 CACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAAC 16261 || || |||||| || | ||||||||||||| || | |||||| || || || || Sbjct 391439 CATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTCAAA 391380 Query 16262 CCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAAT 16321 || ||||| | |||| ||||| |||||||| || | || || || || || ||||| Sbjct 391379 CCGGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGAACCGGAGAAGAAG 391320 Query 16322 ATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGA 16381 | ||| || | ||| ||||| |||| || || ||| | || || || | || Sbjct 391319 ACACCTTCGATAGAGGCAAAGGCGACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGA 391260 Query 16382 ATCCATTTCTGTACCCATTCGGCTTTTT----GTTTTATACAATCCATCGTTTCTATGGC 16437 |||||| | | |||| ||||| || | | ||| | || || | ||||| Sbjct 391259 ATCCATCTTAGAGCCCACTCGGCCTTCTCACCGATTTCT----GGGATGGTGTGAATGGC 391204 Query 16438 CTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTA 16497 || ||||| || |||||| | || | || || ||||| |||| || ||| Sbjct 391203 ATTGAACAAGAATTCACTTTCCTTAGGGTCCTTGATGTAGGTATCGATCAACAAGGAGTA 391144 Query 16498 CATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGC 16557 |||| || || || || || || || || || |||||||| | ||||| | Sbjct 391143 GGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATAGAAACTCTTTGCCTCTGG 391084 Query 16558 TATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGC 16617 | ||| ||||| | | || ||| ||| ||| ||||| || ||||||||| || Sbjct 391083 AACTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGC 391024 Query 16618 AGCAAAAAACGC 16629 || ||||| || Sbjct 391023 GGCGAAAAAGGC 391012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414291324440