Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03- 21] 17 sequences; 12,092,810 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq12 98.7 9e-16 seq10 84.2 2e-11 >seq12 Length=1023116 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | || ||| |||||||| || | ||||| || ||||| |||||||| ||| Sbjct 59841 TACCACCTCTTAGTCTTAACACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGG 59900 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || | || || || || || ||||| |||| | | ||| ||||| |||| Sbjct 59901 ACAAGGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAG 59960 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || ||||| ||||||| || || | || | ||||| | || | Sbjct 59961 GAATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATAGTGTCAGACGATTCAA 60020 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| ||| | ||||| || ||||| || || || ||||||||||| Sbjct 60021 CCTCGAGGGTTATGGTTTTACCCGTCAGTGTCTTAACGAAAATCTGCAT 60069 >seq10 Length=743843 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 44855 GAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTTTGCGGCG 44914 ||| || | ||||| || ||| | ||||||| || ||||| || || || || | Sbjct 391285 GAAAGACTAGTCGCCTTTGCCTCTATCGAAGGTGTCTTCTTCTCCGGTTCCTTCGCCTCC 391344 Query 44915 ATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAATTGATT 44974 || || | |||| | | || |||||||||| |||| || |||||||||||| Sbjct 391345 ATTTTCTGGTTGAAGAAGAGAGGTATGATGCCCGGTTTGACCTTCTCTAACGAATTGATT 391404 Query 44975 TCGAGAGACGAAGGTCTGCACACCAACTTTGCCTGC 45010 | |||||||||||| |||||||| ||||||| ||| Sbjct 391405 TGCAGAGACGAAGGTTTGCACACCGACTTTGCATGC 391440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830310115764