Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq12 127 2e-24
seq9 89.7 4e-13
seq11 82.4 6e-11
>seq12
Length=1023116
Score = 127 bits (140), Expect = 2e-24
Identities = 169/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG--T 45167
|||||||||||||| || |||||||| || || ||||| ||||| ||||||||| |
Sbjct 60299 CCACCTCTCAATCTCAAGACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAGTCGGAT 60358
Query 45168 TCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
||| | | | || |||||||| || ||||| || ||||| | ||||||||| ||||
Sbjct 60359 AACGTT--CTACCATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAG 60416
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCC 45286
| | ||| ||||| || |||||| ||| | || | || | |||| | ||
Sbjct 60417 GAATACCTTCCTTATCTTGAATTTTCGACTTGA-CGTTGTCAATCGTGTCGGAAGATTCG 60475
Query 45287 ACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||||| ||||| ||||| || ||||| ||||| |||||||| |||||
Sbjct 60476 ACCTCCAGAGTAATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 60525
Score = 105 bits (116), Expect = 5e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||| | |||||| ||||| || | ||| |||||| || |||||||||||| |
Sbjct 60527 CCACCTCTTAGTCTTAACACCAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 60586
Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
| ||| | | |||| |||||||| || || || || ||||| | ||| || || ||||
Sbjct 60587 AAGGTT--CTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGAG 60644
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||| || |||||| ||||||| ||| || | | | || | || |
Sbjct 60645 GAATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATAGTATCAGAAGATTCGA 60704
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
| |||| || || || || || |||| |||||| ||||| ||||||||
Sbjct 60705 CTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 60753
Score = 102 bits (112), Expect = 6e-17
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||| | |||||| ||||| || | || ||||| || |||||||||||| |
Sbjct 59843 CCACCTCTTAGTCTTAACACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 59902
Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
| ||| | | |||| |||||||| || || || || ||||| | |||||| || ||||
Sbjct 59903 AAGGTT--CTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAG 59960
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||| || |||||| ||||||| ||| || | | |||| || |
Sbjct 59961 GAATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATAGTGTCAGACGATTCAA 60020
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||| | ||| || || || |||||||| ||||| || || || |||||
Sbjct 60021 CCTCGAGGGTTATGGTTTTACCCGTCAGTGTCTTAACGAAAATCTGCAT 60069
>seq9
Length=443128
Score = 89.7 bits (98), Expect = 4e-13
Identities = 153/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||| || || ||||| | ||| || || |||||||||||||| |
Sbjct 63301 CCACCTCTCAATCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 63242
Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
| ||| | | |||| |||| ||| || || || || ||||| | |||||||| || |
Sbjct 63241 AAGGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 63184
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||| |||||||| ||| ||| ||| || | | |||| | || |
Sbjct 63183 GGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 63124
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAA 45327
| |||| || || ||||| || |||| |||||| |||||
Sbjct 63123 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 63084
>seq11
Length=690553
Score = 82.4 bits (90), Expect = 6e-11
Identities = 101/136 (74%), Gaps = 4/136 (3%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG--T 45167
|||||||| ||||| || ||||| || | ||| ||||| || ||||||||||| |
Sbjct 639465 CCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 639524
Query 45168 TCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
|||| | |||| |||| ||| || ||||| || ||||| | ||||||||||| |
Sbjct 639525 AAAGTT--CTGCCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCGGGTG 639582
Query 45228 GCACACCCTCCTTGTC 45243
| | ||| ||||||||
Sbjct 639583 GGATACCTTCCTTGTC 639598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395075118145357
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |