Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq12 111 1e-19
seq9 105 5e-18
>seq12
Length=1023116
Score = 111 bits (122), Expect = 1e-19
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 18099 CCTCCCCGTAGTCTAAGTACCA--TGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGG 18156
|| || | |||||| | |||| ||| ||||| || || ||||| |||||||||||||
Sbjct 60527 CCACCTCTTAGTCTTAACACCAAATGTAAAGTG--GACTCCTTTTGGATGTTGTAGTCGG 60584
Query 18157 CCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGG 18216
|| ||| ||| ||||||| ||| || || ||| |||| | ||| || ||||| |
Sbjct 60585 ACAAGGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGAG 60644
Query 18217 GCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276
| | ||||| || || ||||| | |||||| | ||| ||| ||| | |||
Sbjct 60645 GAATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATAGTATCAGAAGATTCGA 60704
Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||| | || ||| |||| |||||||| || || ||||||||||||||
Sbjct 60705 CTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 60753
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
|| || | |||||| | |||| || | || ||||| ||||| ||||||||||||| |
Sbjct 59843 CCACCTCTTAGTCTTAACACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 59902
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| ||| ||| ||||||| ||| || || ||| |||| | ||| |||||||| ||
Sbjct 59903 AAGGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGA 59962
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278
| ||||| || || ||||| | |||||| | ||| ||||||| | ||
Sbjct 59963 ATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATAGTGTCAGACGATTCAACC 60022
Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| | ||| ||| |||| || |||| ||| || || ||||| |||||
Sbjct 60023 TCGAGGGTTATGGTTTTACCCGTCAGTGTCTTAACGAAAATCTGCAT 60069
Score = 95.1 bits (104), Expect = 9e-15
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | || ||||| ||||| ||||||||||| | || ||| | | |||||||
Sbjct 470243 ACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAGAGTTCTGCCATCTTCC 470184
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| |||| | ||||||||| || || | |||||||| ||
Sbjct 470183 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGG 470124
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| ||||||| | || ||| | ||| || | ||
Sbjct 470123 ATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAATAGTCTTA 470064
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
||||| || || || || ||||||||||| ||
Sbjct 470063 CCGGTTAAAGTCTTGACGAAAATTTGCATCTT 470032
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/215 (70%), Gaps = 3/215 (1%)
Strand=Plus/Plus
Query 18112 TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAAT 18171
|||| |||| ||| || || ||||| |||||||| |||||||||| | ||| | | ||
Sbjct 59629 TAAG-ACCAGGTGGAGAGTGGATTCCTTTTGAATATTGTAGTCGGATAACGTTCTGCCAT 59687
Query 18172 CTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTAT 18231
|||||| ||| || || ||| | || | ||| ||||| || || | ||||||||||
Sbjct 59688 CTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTAT 59747
Query 18232 CGGCAAT-TTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATG 18290
| ||| ||| | ||| || | ||| ||||||| | || || | ||| |||
Sbjct 59748 CCTGAATCTTGCT-CTTCACGTTGTCAATAGTGTCAGACGATTCAACCTCGAGGGTTATG 59806
Query 18291 CTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| || || |||| || || ||||| || |||||
Sbjct 59807 GTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 59841
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| || || ||||| |||||||| |||||||||| | ||| ||| |||||||
Sbjct 60317 ACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAGTCGGATAACGTTCTACCATCTTCC 60376
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
| ||| || || ||| | || | ||| ||||| || || | ||||||||||| |
Sbjct 60377 AGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTATCTTGA 60436
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|||| |||||| | ||| ||||| | ||| || | || ||| | ||
Sbjct 60437 ATTTTCGACTTGACGTTGTCAATCGTGTCGGAAGATTCGACCTCCAGAGTAATGGTCTTA 60496
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| |||| || || ||||| || |||||
Sbjct 60497 CCAGTCAGCGTCTTAACAAAGATCTGCAT 60525
>seq9
Length=443128
Score = 105 bits (116), Expect = 5e-18
Identities = 142/197 (72%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 18121 TGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATT 18180
||| ||||| ||||||||||||||||||||||| | || ||| ||| ||||||||||
Sbjct 63277 TGTAAAGTG--GATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCCAATT 63220
Query 18181 GTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTT 18240
| || || ||| |||| | ||||||||| || || | |||||||| || ||| |
Sbjct 63219 GCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCT 63160
Query 18241 GTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGG 18300
| |||||| | ||| ||||||| | || ||| | |||||| | || || |
Sbjct 63159 TTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAG 63100
Query 18301 TCAATGTTTTTACAAAA 18317
|||| || || ||||||
Sbjct 63099 TCAAAGTCTTGACAAAA 63083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343921404665
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |