Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq5 235 5e-57
seq10 194 1e-44
seq9 152 5e-32
seq12 107 2e-18
>seq5
Length=565208
Score = 235 bits (260), Expect = 5e-57
Identities = 415/600 (69%), Gaps = 6/600 (1%)
Strand=Plus/Minus
Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400
|||||| || |||| |||||||| || ||||||||||| |||| || | || ||
Sbjct 295858 TTCAACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGAAACAAATCTCTTGCACG 295799
Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460
| || ||||| ||| ||||||| | | ||| | ||| || || | || ||||||||
Sbjct 295798 AATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAAAATCAAAAATATCAGCATGCCA 295739
Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520
|| || ||||| | |||||| ||||| ||||| || || || ||||| ||||| |||||
Sbjct 295738 TGGTTCCAGGTACAGGGCAAAGGCGCCAGGTCTTTTGTTACCACCCTGGTCGACATAACG 295679
Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580
||| ||||| || | || | | ||| || | | ||||| || | ||| | ||
Sbjct 295678 GGCGGTGTTATTAAAAACACGAATCATGGGAATTAACCCGTTAGAGGTACCGTTTGTACC 295619
Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640
|| | ||||| ||| |||| || || | || | ||| || || || | |
Sbjct 295618 AGCAATGTAAGAACCAGTTGAACGAATATTATGGATATGTAGACCAATACCACCAGCAGT 295559
Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700
||| || |||| || |||| ||||| ||||||||| || |||||||| |||||| ||
Sbjct 295558 TTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGATAGAGTCCTCCTT 295499
Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760
| |||||||||||||| || |||||||| | ||| || ||| | || |||| ||
Sbjct 295498 CATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAGCATTAAACAAAGT 295439
Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820
|| ||| || ||||||||| ||||||| || || || || | || || ||
Sbjct 295438 TGGAGAGGCATGAGTAAAGTATTTTAGAGACATTAAGTTATATGTTTCTAGAGCCGCTTC 295379
Query 23821 AATGTCCTCT-CCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGA 23879
|||| |||| ||||| || || | ||||| | ||| || | || ||| || | |||
Sbjct 295378 GATGT-CTCTGCCGTGGATGCCCAGTGCGACTCTCATAATTAAGTGTTGTGGACGTTCGG 295320
Query 23880 C--CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937
| | ||| ||||| ||| | | | ||| ||||||| || ||||| || ||||||||
Sbjct 295319 CCACTTGA--CCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTGAAACCAAAATA 295262
>seq10
Length=743843
Score = 194 bits (214), Expect = 1e-44
Identities = 542/820 (66%), Gaps = 19/820 (2%)
Strand=Plus/Plus
Query 57591 GCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGG 57650
|| ||||| || || ||||||| |||||| | || ||||||||||| | ||||||
Sbjct 390904 GCCGAAGCCTCTTTCTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATTCATGATTGG 390963
Query 57651 GATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCC 57707
|| | | || ||| |||||| ||||||| || | || |||||||||
Sbjct 390964 AATAACAGAATGAACGAAAACGAGAGATTTTTTATTTCTAGAGTTCTTGCCTTTTTCGCC 391023
Query 57708 GCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTG 57767
|| || || ||||||||||| || || ||||| |||| || || ||||| |||||
Sbjct 391024 GCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTTCAAGTT 391083
Query 57768 ACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATG 57827
| ||||| | | || || || || ||| | |||||||| | ||||| ||||
Sbjct 391084 CCAGAGGCAAAGAGTTTCTATGGTTTCCAAATCATGATTGAAAATATTCATTCTGAAACC 391143
Query 57828 TATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGAC-TGTTCAA 57886
|| || | | |||||||| ||| | |||||| | | | || | | | |||||||
Sbjct 391144 TACTCCTTGTTGATCGATACCTACATCAAGGAC-CCTAAGGAAAGTGAATTCTTGTTCAA 391202
Query 57887 CGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAA 57946
|| || | || || || | |||| ||||||| |||||| | | | |||||| |
Sbjct 391203 TGCCATTCACACCATCCCAGAAATCGGTGAGAAGGCCGAGTGGGCTCTAAGATGGATTCA 391262
Query 57947 AAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATT 58006
| ||| ||| ||| | || || ||| |||| || ||| | |||||||| | ||
Sbjct 391263 AGACGCTGACGCCTTGTTTGGTGAAAGACTAGTCGCCTTTGCCTCTATCGAAGGTGTCTT 391322
Query 58007 CTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCT 58066
||| || || ||| || | || || ||| ||||||| | || |||||||||| |
Sbjct 391323 CTTCTCCGGTTCCTTCGCCTCCATTTTCTGGTTGAAGAAGAGAGGTATGATGCCCGGTTT 391382
Query 58067 GACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126
||| || ||||| ||||| | | ||||| ||| | || || || ||||| ||| |
Sbjct 391383 GACCTTCTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCACACCGACTTTGCATGCTT 391442
Query 58127 AATGTACTCTCACATTGTCAATAAACC-GACGCGGGATCGCATCTTG--GACATTATCAC 58183
||| | | || | || ||||| ||| | | | | ||| | ||| ||||
Sbjct 391443 GTTGTTCGCCCATTTGAAGAACAAACCAGACCC---AGCCATTGTTGAAAAAATTGTCAC 391499
Query 58184 CGAGGCGGTCGCGATCGAA-AATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCG 58242
|||||| || | || ||| || || | || || ||| | || || ||| |||| |
Sbjct 391500 CGAGGCTGTGGAAATTGAACAAAGA-TACTTCTTGGATGCCTTGCCAGTTGCCTTGCTAG 391558
Query 58243 GTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCG 58302
|||||||| ||| | ||| | ||| ||||||| ||||| |||||||||||| |||
Sbjct 391559 GTATGAACGCTGACCTAATGAACCAATACGTTGAGTTCGTTGCTGACAGACTTTTGGTCG 391618
Query 58303 AACTGATTGGAGAGCGTCATTACAACACG---AAAAATCCGTTTGATTTTATGAATCTGA 58359
|| |||| | | ||| ||| | |||| || || || |||||| | |
Sbjct 391619 -CCT--TTGGTAACAAGAAATACTACAAGGTCGAAAACCCCTTCGACTTTATGGAAAACA 391675
Query 58360 TCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGT 58399
|||| | | || ||||| ||||| || ||||| | |||
Sbjct 391676 TCTCCTTGGCTGGTAAGACCAACTTCTTTGAAAAGAGAGT 391715
>seq9
Length=443128
Score = 152 bits (168), Expect = 5e-32
Identities = 417/639 (65%), Gaps = 0/639 (0%)
Strand=Plus/Plus
Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400
|| ||| ||| |||||||||| || || ||||| ||||| ||| | || | || ||
Sbjct 234578 TTGAACACGTTTCATAAAAAGGTCAGGAATCCACAGAGCAGGGAATAAATCCCTTGCACG 234637
Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460
| || ||||| || | | ||| | | ||| | |||||| || | || || |||||
Sbjct 234638 AATTTCTTCTTTACCATGGGTTTTTCTAATATCGACAAAGTCGAAGATATCTGCGTGCCA 234697
Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520
|| || | | ||| |||||| || || |||||||| || || || || || || |||||
Sbjct 234698 TGGTTCCAAGAAAAGGGCAAAGGCACCAGGTCTCTTGTTACCTCCTTGGTCCACATAACG 234757
Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580
|| || |||||| | || | | ||| || | | || || || | ||| ||
Sbjct 234758 AGCAGTATTGTTGAAAACACGAATCATAGGAATCAACCCATTTGAAGTACCGTTGGTACC 234817
Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640
|| | | |||||| | | || | ||||| || || | ||| | || || | |
Sbjct 234818 GGCGATATAAGAACCTGTGGAACGGATGTTGTTAATATGAAGACCAACACCACCTGCAGT 234877
Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700
|| || ||||| || |||| ||||| ||| || || || || || || ||| || ||
Sbjct 234878 CTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCAATAGAGTCATCCTT 234937
Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760
| || | | |||||| ||||||||||| | | || ||| | || || | ||
Sbjct 234938 CATGGCAATTAGGAAACATGAAGACATTTGGGGGTGTGGAGTACCAGCGTTAAATAAGGT 234997
Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820
||| ||||| || || |||| ||||| | |||||| || | | | | |||
Sbjct 234998 TGGGGAAGCGTGAGTGAAATATCTTAATGACATCAAATTGTAGGTCTTCAGCACAGAATC 235057
Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGAC 23880
|| || ||||| ||||| | || || ||||| | || || || || | || |
Sbjct 235058 GATATCACTACCGTGGATACCTAGCGCCACACGCATAACCAAGTGCTGTGGCCGTTCTGC 235117
Query 23881 CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTC 23940
| | ||||| | | | | || ||| ||||| | || || || || ||||||||
Sbjct 235118 CACTTCACCGTTCAGTCTTAGCAAATACGAACGCTCCAAAGTCTTGAACCCAAAATACGT 235177
Query 23941 ATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979
||| || || || | ||||| ||| |||||||| |||||
Sbjct 235178 ATACTTGAAATCTCTATCGTACACGATGGCCGAGTTCAA 235216
Score = 91.5 bits (100), Expect = 1e-13
Identities = 155/222 (70%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260
||| || |||||| |||| || || || ||||| | || |||||| | || |||| | |
Sbjct 63083 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 63142
Query 31261 CGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTC 31319
|| | ||||| || ||| | | |||||||||| | || || ||||| || |
Sbjct 63143 TGACAATGTCAAGTCAAAGATTCAAG-ACAAGGAAGGTATCCCACCTGACCAACAAAGAT 63201
Query 31320 TAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAA 31379
| || || ||||| || || ||||||||| || || || || || ||||||||||
Sbjct 63202 TGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAA 63261
Query 31380 AAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||||| ||| | || | || | ||| |||| || ||||
Sbjct 63262 AAGAATCCACTTTACACTTAGTCTTGAGATTGAGAGGTGGTA 63303
>seq12
Length=1023116
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| || || ||||| || || ||||| || ||| | || |||||| | |||
Sbjct 60297 ATGCAAATTTTTGTCAAAACTCTAACTGGTAAAACTATAACCCTAGAGGTTGAATCTTCC 60238
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | |||||| | || ||||| || || | || || || ||
Sbjct 60237 GACACTATTGACAACGTCAAAAGTAAGATCCAAGACAAAGAGGGTATCCCACCAGATCAA 60178
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | || || || ||||| || || |||||||| || || || |||||||||
Sbjct 60177 CAAAGACTTATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACACTGTCTGATTATAAC 60118
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| |||||||| || | ||| | || || ||| |||| || ||||
Sbjct 60117 ATTCAGAAAGAATCTACGTTGCATTTAGTGCTGAGATTGAGAGGTGGTA 60069
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| || |||||| |||| || ||||| || || | || || ||| | ||
Sbjct 60753 ATGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTCGAATCTTCT 60694
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | | || | ||||| | ||| |||||| ||||| | || || || |||
Sbjct 60693 GATACTATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGATCAG 60634
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | | || || ||||| || || |||||||| || || || ||| || |||
Sbjct 60633 CAGAGATTGATCTTTGCTGGTAAGCAACTGGAAGACGGTAGAACCTTGTCCGACTACAAC 60574
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| ||||| || || ||| | ||| |||| | ||||| || || ||||
Sbjct 60573 ATCCAAAAGGAGTCCACTTTACATTTGGTGTTAAGACTAAGAGGTGGTA 60525
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| |||||||||||||| |||||| | || || || || || ||| | || |||||| |
Sbjct 470032 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTAGAAGTTGAATCT 470091
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | | || | ||||| | || ||||||||||| | || || |||
Sbjct 470092 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGAC 470151
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | | || || ||||| || || |||||||| | ||| || || ||
Sbjct 470152 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTCTGTCTGACTAC 470211
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||||| ||||| ||||| ||| | || |||| | ||| |||| || |||
Sbjct 470212 AACATCCAAAAGGAATCTACTTTGCACTTGGTCTTGAGATTGAGAGGTGGT 470262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766305274640
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