Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq15 145 2e-29
seq10 145 2e-29
seq5 104 5e-17
>seq15
Length=1078405
Score = 145 bits (160), Expect = 2e-29
Identities = 209/296 (71%), Gaps = 18/296 (6%)
Strand=Plus/Minus
Query 35333 ATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCA 35392
|| ||| ||| |||||| || || |||| | | || | | ||||| ||||| |
Sbjct 456497 ATTTGGGACGGTAATGGATCCCGTGAATATCTAGATAAGATGGGGTTCACAGATAGGAAA 456438
Query 35393 GAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGAT 35452
| ||| |||||||| ||||| || |||||||||||| | ||||| || ||| |||| |
Sbjct 456437 GTGGGGGATTTGGGGCCCGTTTATGGATTCCAATGGAGGCATTTCGGCGCTAAATACAAG 456378
Query 35453 ACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATT------GGCCA---ATATA 35503
|| ||| | ||| ||| ||||| |||||||||||||||| || || ||| |
Sbjct 456377 ACGTGTGATGACGACTATGCTGGACAGGGTATTGATCAATTGAAGCAGGTCATTCATAAA 456318
Query 35504 CTAAAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCT 35563
|||||||| |||||| |||||||||| || ||||||| || ||||||||
Sbjct 456317 CTAAAGAC---------AAATCCTTATGATAGAAGAATTATTATGAGTGCTTGGAATCCA 456267
Query 35564 ATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619
||| || || |||||| | || ||||||||||| | |||||||||||
Sbjct 456266 GCTGATTTTGACAAGATGGCTTTGCCACCATGCCACATTTTCTCACAATTTTATGT 456211
>seq10
Length=743843
Score = 145 bits (160), Expect = 2e-29
Identities = 365/547 (67%), Gaps = 22/547 (4%)
Strand=Plus/Plus
Query 101820 TCTTGTTTAACGC--TGCACAACACTTCCCCGCCATCAAGAAGAAGGAGCAGTGGGCTAT 101877
||||||| || || | |||| || |||| | ||| |||||| |||||||| |
Sbjct 391193 TCTTGTTCAATGCCATTCACACCA--TCCCAGAAATCGGTGAGAAGGCCGAGTGGGCTCT 391250
Query 101878 TAATTGGATGCAAAGCAATAACGATTTG---GCGGAACTAATTGTTGCCTTTGCTGCAGT 101934
| ||||| ||| | | ||| ||| | ||| | | || |||||||| | |
Sbjct 391251 AAGATGGATTCAAGACGCTGACGCCTTGTTTGGTGAAAGACTAGTCGCCTTTGCCTCTAT 391310
Query 101935 TGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATCAAGAACAGGGGTAT 101994
||||| ||||||| ||| | ||||| |||||||||||| | ||||| || |||||
Sbjct 391311 CGAAGGTGTCTTCTTCTCCGGTTCCTTCGCCTCCATTTTCTGGTTGAAGAAGAGAGGTAT 391370
Query 101995 TTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAAGGTCTTCATCGCGA 102054
|||| ||| | |||| ||| || || || |||| || ||||||||| | || |||
Sbjct 391371 GATGCCCGGTTTGACCTTCTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCACACCGA 391430
Query 102055 CTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCATCAAGAGAAAG-GATTC 102113
|||||||||| || |||| | |||| || | | | ||| || |||
Sbjct 391431 CTTTGCATGCTTGTTGTTCGCCCA----TTTGAAGA---ACAAACCAGACCCAGCCATTG 391483
Query 102114 TTG---AAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTCACAGTTTCCCTGC 102170
||| |||||||||| || || || |||||||||| || || | | || |||
Sbjct 391484 TTGAAAAAATTGTCACCGAGGCTGTGGAAATTGAACAAAGATACTTCTTGGATGCCTTGC 391543
Query 102171 CTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTGAATTTGTGGCAG 102230
| ||| || | || |||||| | | |||| ||| ||| |||| || || || |
Sbjct 391544 CAGTTGCCTTGCTAGGTATGAACGCTGACCTAATGAACCAATACGTTGAGTTCGTTGCTG 391603
Query 102231 ATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAATGTTACCAACCCCTTCCC 102288
| | ||| ||||| | | || || ||||| |||| || || |||||||||
Sbjct 391604 ACAGACTTTTGGTCGCCTTTGGTAACAAGAAA--TACTACAAGGTCGAAAACCCCTTCGA 391661
Query 102289 ATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAAGAGAGTCGCCGA 102348
|| ||||| || || ||| | | |||||||||||| ||||||||||||||| | ||
Sbjct 391662 CTTTATGGAAAACATCTCCTTGGCTGGTAAGACCAACTTCTTTGAAAAGAGAGTCTCTGA 391721
Query 102349 GTATCAA 102355
|| |||
Sbjct 391722 TTACCAA 391728
>seq5
Length=565208
Score = 104 bits (114), Expect = 5e-17
Identities = 113/150 (75%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 94188 AGAAGCCAAATTGCACACTGCAGTTTCCTCCGAATCACTGTACTGGACAATTTCAGTGCA 94247
||||||||| || || || |||||||| |||| | | ||||| ||||||||| |||
Sbjct 296170 AGAAGCCAAGTTACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAATTTCACAGCA 296111
Query 94248 CAAATTTGAAGACTTGATGATGCCGACATTTTCTTGGTTAGACTTTCTATTGATGGTATC 94307
|| ||||| |||||||| | || | |||| ||||||||||||||| ||| | |||
Sbjct 296110 TAAGTTTGATGACTTGATAACACCTAAGTTTTTTTGGTTAGACTTTCTGTTGCAAGCATC 296051
Query 94308 CTTAAAGCACACATAAGGTGTTCCAGTTTC 94337
|||| | ||| ||||||| || |||||
Sbjct 296050 CTTATAAACGACAAAAGGTGTACCCGTTTC 296021
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583784456235
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |