Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03- 21] 17 sequences; 12,092,810 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq15 145 2e-29 seq10 145 2e-29 seq5 104 5e-17 >seq15 Length=1078405 Score = 145 bits (160), Expect = 2e-29 Identities = 209/296 (71%), Gaps = 18/296 (6%) Strand=Plus/Minus Query 35333 ATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCA 35392 || ||| ||| |||||| || || |||| | | || | | ||||| ||||| | Sbjct 456497 ATTTGGGACGGTAATGGATCCCGTGAATATCTAGATAAGATGGGGTTCACAGATAGGAAA 456438 Query 35393 GAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGAT 35452 | ||| |||||||| ||||| || |||||||||||| | ||||| || ||| |||| | Sbjct 456437 GTGGGGGATTTGGGGCCCGTTTATGGATTCCAATGGAGGCATTTCGGCGCTAAATACAAG 456378 Query 35453 ACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATT------GGCCA---ATATA 35503 || ||| | ||| ||| ||||| |||||||||||||||| || || ||| | Sbjct 456377 ACGTGTGATGACGACTATGCTGGACAGGGTATTGATCAATTGAAGCAGGTCATTCATAAA 456318 Query 35504 CTAAAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCT 35563 |||||||| |||||| |||||||||| || ||||||| || |||||||| Sbjct 456317 CTAAAGAC---------AAATCCTTATGATAGAAGAATTATTATGAGTGCTTGGAATCCA 456267 Query 35564 ATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619 ||| || || |||||| | || ||||||||||| | ||||||||||| Sbjct 456266 GCTGATTTTGACAAGATGGCTTTGCCACCATGCCACATTTTCTCACAATTTTATGT 456211 >seq10 Length=743843 Score = 145 bits (160), Expect = 2e-29 Identities = 365/547 (67%), Gaps = 22/547 (4%) Strand=Plus/Plus Query 101820 TCTTGTTTAACGC--TGCACAACACTTCCCCGCCATCAAGAAGAAGGAGCAGTGGGCTAT 101877 ||||||| || || | |||| || |||| | ||| |||||| |||||||| | Sbjct 391193 TCTTGTTCAATGCCATTCACACCA--TCCCAGAAATCGGTGAGAAGGCCGAGTGGGCTCT 391250 Query 101878 TAATTGGATGCAAAGCAATAACGATTTG---GCGGAACTAATTGTTGCCTTTGCTGCAGT 101934 | ||||| ||| | | ||| ||| | ||| | | || |||||||| | | Sbjct 391251 AAGATGGATTCAAGACGCTGACGCCTTGTTTGGTGAAAGACTAGTCGCCTTTGCCTCTAT 391310 Query 101935 TGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATCAAGAACAGGGGTAT 101994 ||||| ||||||| ||| | ||||| |||||||||||| | ||||| || ||||| Sbjct 391311 CGAAGGTGTCTTCTTCTCCGGTTCCTTCGCCTCCATTTTCTGGTTGAAGAAGAGAGGTAT 391370 Query 101995 TTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAAGGTCTTCATCGCGA 102054 |||| ||| | |||| ||| || || || |||| || ||||||||| | || ||| Sbjct 391371 GATGCCCGGTTTGACCTTCTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCACACCGA 391430 Query 102055 CTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCATCAAGAGAAAG-GATTC 102113 |||||||||| || |||| | |||| || | | | ||| || ||| Sbjct 391431 CTTTGCATGCTTGTTGTTCGCCCA----TTTGAAGA---ACAAACCAGACCCAGCCATTG 391483 Query 102114 TTG---AAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTCACAGTTTCCCTGC 102170 ||| |||||||||| || || || |||||||||| || || | | || ||| Sbjct 391484 TTGAAAAAATTGTCACCGAGGCTGTGGAAATTGAACAAAGATACTTCTTGGATGCCTTGC 391543 Query 102171 CTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTGAATTTGTGGCAG 102230 | ||| || | || |||||| | | |||| ||| ||| |||| || || || | Sbjct 391544 CAGTTGCCTTGCTAGGTATGAACGCTGACCTAATGAACCAATACGTTGAGTTCGTTGCTG 391603 Query 102231 ATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAATGTTACCAACCCCTTCCC 102288 | | ||| ||||| | | || || ||||| |||| || || ||||||||| Sbjct 391604 ACAGACTTTTGGTCGCCTTTGGTAACAAGAAA--TACTACAAGGTCGAAAACCCCTTCGA 391661 Query 102289 ATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAAGAGAGTCGCCGA 102348 || ||||| || || ||| | | |||||||||||| ||||||||||||||| | || Sbjct 391662 CTTTATGGAAAACATCTCCTTGGCTGGTAAGACCAACTTCTTTGAAAAGAGAGTCTCTGA 391721 Query 102349 GTATCAA 102355 || ||| Sbjct 391722 TTACCAA 391728 >seq5 Length=565208 Score = 104 bits (114), Expect = 5e-17 Identities = 113/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 94188 AGAAGCCAAATTGCACACTGCAGTTTCCTCCGAATCACTGTACTGGACAATTTCAGTGCA 94247 ||||||||| || || || |||||||| |||| | | ||||| ||||||||| ||| Sbjct 296170 AGAAGCCAAGTTACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAATTTCACAGCA 296111 Query 94248 CAAATTTGAAGACTTGATGATGCCGACATTTTCTTGGTTAGACTTTCTATTGATGGTATC 94307 || ||||| |||||||| | || | |||| ||||||||||||||| ||| | ||| Sbjct 296110 TAAGTTTGATGACTTGATAACACCTAAGTTTTTTTGGTTAGACTTTCTGTTGCAAGCATC 296051 Query 94308 CTTAAAGCACACATAAGGTGTTCCAGTTTC 94337 |||| | ||| ||||||| || ||||| Sbjct 296050 CTTATAAACGACAAAAGGTGTACCCGTTTC 296021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583784456235