Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq9 192 5e-44
seq5 190 2e-43
seq10 149 6e-31
>seq9
Length=443128
Score = 192 bits (212), Expect = 5e-44
Identities = 979/1544 (63%), Gaps = 45/1544 (3%)
Strand=Plus/Plus
Query 37120 AATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTG 37179
|||| | |||||| || || || || || ||||| || || | | | || || ||
Sbjct 233670 AATAAATATGGATTAACGACTTGGAATTCACCAGACAAGACACGACGAGAGTACATGTTT 233729
Query 37180 CTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGC 37239
||| |||||| | | || |||| | | |||||||| || || ||||| |||
Sbjct 233730 GAAGTCACTGGTTCGAAACATTCGTTATATCCAAGAATTTGAGAAGTTGAGGCAGTTGGC 233789
Query 37240 ATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTA--GTT 37297
||||| || ||| | ||||| ||||||||| | ||| |||| ||| |||
Sbjct 233790 ATTGGCGCCATTGTCAAAGAGTTTCTTAATCCATGTTTGACAATGTCCTTTCTTAAGGTT 233849
Query 37298 CATTCCAATCCCATAAATCTGTTGGGTT--CTTTAACCACATATCATATTGTAGAATACC 37355
| ||||||||| | | | ||| || | || |||||| ||| |||||||||||||
Sbjct 233850 --TCCCAATCCCACATACCAAATGGCTTAGCATT--CCACATGTCAAATTGTAGAATACC 233905
Query 37356 TTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCA 37415
|||| ||||||||| | | | || ||| || | | | || | ||| ||
Sbjct 233906 TTTAGAGGCTGGAGAACCTTCGAAAGTAGAATACTTACCTTCCTTCTGTGCCAATTCACA 233965
Query 37416 ACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGC 37475
| ||| || | |||| ||| || ||||||||||| ||| | || || ||| ||
Sbjct 233966 GGAGGCTTCAAGAGTAGCATGATAAATGGTTTCGAAAATCTGTTTGTTCAAAGTTTGAGC 234025
Query 37476 TTCTTCGCTATCGAATGCATAGCC-CAATAATATAAACACATCAGCCAAACCCTGAACAC 37534
|||||| || || | ||| | ||| | ||| | ||| |||| ||| |||||||
Sbjct 234026 TTCTTCTGATTCAAAAGG-TAGACGCAACATCATATAGGTATCGGCCAGACCTTGAACAC 234084
Query 37535 CGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAAT 37594
| | | || |||||||| || |||| || | | ||| |||||||||||||
Sbjct 234085 CCAAGGCAATAGGTCTATGCCTCATATTTGAATTTCTGGCTTCAGGAACTGGATAATAAT 234144
Query 37595 TGATATCTATTATTTTATTTAGATTTTTAACTAGT-ATTTTCGTAATTAT-TCTCAACTT 37652
| || || | | | || | | || | || | | ||| | |||| | | ||||
Sbjct 234145 TACGGTCGATGACTCTGTTCA-AGTTATGGGTAATGACTTTAGCAATTTCATGTAAACTC 234203
Query 37653 GTCGAACATAAATACGTT-ATTATTAACAAATTTA-----CTCAACGAA----------- 37695
||||| || | || | | | ||| || || | ||| || ||
Sbjct 234204 -TCGAAATTATA-ACTTGCAGTTTTACCATCTTCAGACATCTCGACAAATGCTGGGAGGG 234261
Query 37696 --ATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTG 37753
||||| |||||||||| || || ||||||| | | | | | | || ||
Sbjct 234262 CAATAGAGGCTAGATTACAAACGGCGGTTTCATCTGGGGAAGAATACTCGACGATTTCAC 234321
Query 37754 TACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAG 37813
||| | || ||| |||| || ||||| || ||| || | ||| | ||||| |
Sbjct 234322 AACACAAGTTGGATGATTTAATGGTACCCAAGTTCTGTTGGTTTGTCTTTCTGTTACATG 234381
Query 37814 AATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCC 37873
|| || || | || | || || ||| |||| |||| || | | ||| | | ||
Sbjct 234382 CGTCCTTGTAAACCATGAAAGGTGTACCTGTTTCTGTTTGTGCTTGTAAAATGGCATACC 234441
Query 37874 ATAAACTTCTTGCTTTAACGATCGCTTTA--AtttttttCTTTGTTTCGTATTCTATATA 37931
|||| || ||||||| | | |||| | ||| | |||||| ||||
Sbjct 234442 ATAACTTTTGGGCTTTAATGGT---TTTACCACGACCTTCCCT--TTCGTAACGGGTATA 234496
Query 37932 TAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACAT 37991
|| | | ||| || | ||||| ||||| ||| ||||| | | ||| | |
Sbjct 234497 TAGCTCTTCAAATTCGTCACCCCAGACATCATCTAAACCTGGGGCAGCACTGGGAGAAAA 234556
Query 37992 TAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGC 38051
|| || ||| |||| | || || |||| |||||| | ||||| | ||| | ||
Sbjct 234557 TAAAGTCCAGGGACCATCCTCTTGAACACGTTTCATAAAAAGGTCAGGAATCCACAGAGC 234616
Query 38052 AGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAA 38111
|| |||||||| | | | | |||||| || || | ||||| | | |||
Sbjct 234617 AGGGAATAAATCCCTTGCACGAATTTCTTCTTTACCATGGGTTTTTCTAATATCGACAAA 234676
Query 38112 ATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATC 38171
||||| ||||| |||||||||||||| | ||| | | || || ||||| || |
Sbjct 234677 GTCGAAGATATCTGCGTGCCATGGTTCCAAGAAAAGGGCAAAGGCACCAGGTCTCTTGTT 234736
Query 38172 ACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACC 38231
|||||| || | | ||| | | | || || || | | | | |||||| | | ||
Sbjct 234737 ACCTCCTTGGTCCACATAACGAGCAGTATTGTTGAAAACACGAATCATAGGAATCAACCC 234796
Query 38232 ATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGA 38291
||| || | ||||| |||||| ||||||| ||| | | || || || | ||
Sbjct 234797 ATTTGAAGTACCGTTGGTACCGGCGATATAAGAACCTGTGGAACGGATGTTGTTAATATG 234856
Query 38292 CAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATAT 38351
| || | ||||||||| || || || | ||| |||| ||| || |||||| | ||
Sbjct 234857 AAGACCAACACCACCTGCAGTCTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAAT 234916
Query 38352 ACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGG 38411
|||||| ||| ||||||||| || | | || ||||| ||||||||| || |||
Sbjct 234917 ACCTTCAATAGAGTCATCCTTCATGGCAATTAGGAAACATGAAGACATTTGGGGGTGTGG 234976
Query 38412 AGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATT 38471
||| || ||||||||||| || || || || || |||| || || |||| ||||
Sbjct 234977 AGTACCAGCGTTAAATAAGGTTGGGGAAGCGTGAGTGAAATATCTTAATGACATCAAATT 235036
Query 38472 ATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAG 38531
|| || | | ||| ||| ||||||| ||||| |||||||| | || | ||| |
Sbjct 235037 GTAGGTCTTCAGCACAGAATCGATATCACTACCGTGGATACCTAGCGCCACACGCATAAC 235096
Query 38532 CATATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAA 38591
|| || ||||| | |||| | || | ||| || | || | |||||| || ||
Sbjct 235097 CAAGTGCTGTGGCCGTTCTGCCACTTCACCGTTCAGTCTTAGCAAATACGAACGCTCCAA 235156
Query 38592 TGTTTTTATTCCAAAATAACTATA--TGAATAATCTCTATCGTA 38633
|| || | |||||||| |||| ||| |||||||||||||
Sbjct 235157 AGTCTTGAACCCAAAATACGTATACTTGA--AATCTCTATCGTA 235198
>seq5
Length=565208
Score = 190 bits (210), Expect = 2e-43
Identities = 417/622 (67%), Gaps = 2/622 (0%)
Strand=Plus/Minus
Query 38013 TTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCT 38072
||| || || | ||| || | |||||| | ||||| |||| ||| |||||| | | |
Sbjct 295858 TTCAACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGAAACAAATCTCTTGCACG 295799
Query 38073 ATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCA 38132
| |||||| || || |||||||| | | |||||| || |||||||| |||||
Sbjct 295798 AATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAAAATCAAAAATATCAGCATGCCA 295739
Query 38133 TGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCT 38192
|||||| | || | | | || || |||||||| | ||| ||||| | | ||| |
Sbjct 295738 TGGTTCCAGGTACAGGGCAAAGGCGCCAGGTCTTTTGTTACCACCCTGGTCGACATAACG 295679
Query 38193 AACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACC 38252
| ||||||||| | | | | ||| || | || || ||||| | |||||| ||||
Sbjct 295678 GGCGGTGTTATTAAAAACACGAATCATGGGAATTAACCCGTTAGAGGTACCGTTTGTACC 295619
Query 38253 GGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATG 38312
| || |||| ||| | | || |||||| || | || || ||||| |||
Sbjct 295618 AGCAATGTAAGAACCAGTTGAACGAATATTATGGATATGTAGACCAATACCACCAGCAGT 295559
Query 38313 TTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTT 38372
||| || || ||||| |||| ||| || || || | ||||| || ||| ||| |||||
Sbjct 295558 TTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGATAGAGTCCTCCTT 295499
Query 38373 TATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGT 38432
|| | | | |||||| ||||||||||| |||||| || || ||||| || ||
Sbjct 295498 CATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAGCATTAAACAAAGT 295439
Query 38433 AGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATC 38492
||||| ||||| | || ||||| |||| | ||||||||||||| | | ||
Sbjct 295438 TGGAGAGGCATGAGTAAAGTATTTTAGAGACATTAAGTTATATGTTTCTAGAGCCGCTTC 295379
Query 38493 TATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTAT 38552
|| || | |||||| || || || | || ||||| | | |||||||| | |||
Sbjct 295378 GATGTCTCTGCCGTGGATGCCCAGTGCGACTCTCATAATTAAGTGTTGTGGACGTTCGGC 295319
Query 38553 TATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATAACT 38612
| || | || | | |||| ||| || ||| || ||||| | |||||||||||
Sbjct 295318 CACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTGAAACCAAAATAACT 295259
Query 38613 ATA-TGAATAATCTCTATCGTA 38633
|| || | ||||||| || ||
Sbjct 295258 GTACTGGA-AATCTCTGTCATA 295238
Score = 167 bits (184), Expect = 2e-36
Identities = 534/816 (65%), Gaps = 17/816 (2%)
Strand=Plus/Minus
Query 36814 GATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAA 36873
||||| | || ||||||| || ||||| || || || | ||| |||| ||||||
Sbjct 297075 GATGCGGCTTGGGTTCTCAAGTAGTACATACCGGTCTTCAATCCCTTCTTCCACCCGTAA 297016
Query 36874 AAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTCATTGATTGA 36933
||||||||||| || || || | || || | | | | ||| ||| |||
Sbjct 297015 AAATGCATACTTGTTAGCTTACCCATAGTTGGGGCACGCAAGAACAAATTCAATGAATGA 296956
Query 36934 CTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATC 36993
|||||| ||| | || | ||||||||||| | | ||| ||||| || ||
Sbjct 296955 GATTGATCGATATAAACAGAACGATCGGCTGCCATGTTAATGATAGTCTTTTGTGAAATT 296896
Query 36994 TCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT---AAATGTTGAATA 37050
||||| || ||||| |||| | || | | | ||| | || | ||| ||||||
Sbjct 296895 TCCCAGACAGTTTTGTATAAATCCTTCAATTCTTGTGGAACATTTGGTAAACCTTGAATG 296836
Query 37051 GAACCATTATGTAACA-CAATTGTATTCTTT-ATGTCATTATTCCACATATTTCTACTTA 37108
|| || || ||| | ||| | | | ||| || | | || ||| ||| | | |
Sbjct 296835 GAGCCGTTCTGTGTAATCAAAT--ACTGTTTCATACCCTCATCCCAAATACCTAAATCAA 296778
Query 37109 TTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTG 37168
| || | | || || || || ||||| || || || || ||||| || | | |
Sbjct 296777 CCAAATCGCGTAGTAAGTAAGGGTTCACAACTTGGAATTCACCGGATAAGACACGACGGG 296718
Query 37169 TATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAG 37228
|| |||||| ||| |||||||| | ||||||| || |||||||| || || |
Sbjct 296717 AGTACATATTGGAGGTAACTGGTTCAAAACATTCATTATAACCCAATATTTGGGACGTGG 296658
Query 37229 ATGCAGTAGGCATTGGTGCTAT--TAGAAGGCTATTTCTCAATCCATGTGT-ATTAATTC 37285
||||||||||||||||||| || | ||| | |||| | ||||| | || | ||
Sbjct 296657 ATGCAGTAGGCATTGGTGCCATGGTCAAAGAGT--TTCTAATACCATGCTTCATGACATC 296600
Query 37286 T-CTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACC-ACATATCATA 37343
| | | ||| || ||||||||| | | || ||||| || || ||||||| |
Sbjct 296599 TTCCCTCAAAGT--ATCCCAATCCCACATGCC-GTAGGGTTTTTGGTCCCACATATCGAA 296543
Query 37344 TTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTT 37403
|| || ||||||| | ||||||||| | | | || || || ||||||| |||
Sbjct 296542 CTGAAGTATACCTTGAGAAGCTGGAGAACCTTGGAAGGTTTCGTATGGTCCGTCCTTTTG 296483
Query 37404 AGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATT 37463
||||||||| ||| || ||| | | ||||| ||| |||||||| || ||||| |||||
Sbjct 296482 AGCTAGTTCACAAGAAGCTTCCATAGAGGCATGATAAATTGTTTCAAAGATTTGGATATT 296423
Query 37464 TAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAA 37523
|| || || ||||| ||| || | | | | || || || ||||||||
Sbjct 296422 TAGTAAACGGGCCTCTTCAGAATCAAAGGGTAAACGTAGCAACATGAAAGTGTCAGCCAA 296363
Query 37524 ACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCAC 37583
||| |||||||| | | | || ||||||||| || |||| ||||| || |||| ||
Sbjct 296362 ACCTTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATCTTTTCGCTTCTTCAAC 296303
Query 37584 TGGATAATAATTGATATCTATTATTTTATTTAGATT 37619
|| || ||||| ||| || | | | |||| |||
Sbjct 296302 AGGGTAGTAATTACGATCAATAACTCTGTTTAAATT 296267
>seq10
Length=743843
Score = 149 bits (164), Expect = 6e-31
Identities = 397/601 (66%), Gaps = 22/601 (4%)
Strand=Plus/Minus
Query 11621 AACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAA 11680
|||| || || ||||| || || |||||||||||||| | || | ||| |||||
Sbjct 391448 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAG 391389
Query 11681 AATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCA 11740
|| || || |||||||||| |||| || || | ||| || || | || || |||||
Sbjct 391388 AAGGTCAAACCGGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGAACCG 391329
Query 11741 GAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATACCTTGTTG 11800
|| ||||| | || || | || ||||| || |||| |||||| ||| | | ||
Sbjct 391328 GAGAAGAAGACACCTTCGATAGAGGCAAAGGCGACTAGTCTTTCACCAAACAAGGCGTCA 391269
Query 11801 ----CTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCC----ATTG 11852
|| || |||||| || ||||| || || |||| || ||| | || |
Sbjct 391268 GCGTCTTGA-ATCCATCTTAGAGCCCACTCGGCCTTCTC----ACCGATTTCTGGGATGG 391214
Query 11853 TTTCTATAGCGTTAAATAAATGCATTT--TTTCTATATTATCTCTTACATATGTATCTAT 11910
| | || || || || || | ||| |||| || || | | || ||||| ||
Sbjct 391213 TGTGAATGGCATTGAACAA--GAATTCACTTTCCTTAGGGTCCTTGATGTAGGTATCGAT 391156
Query 11911 TAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACA 11970
|| || || |||| |||||||||||||| || ||||| || ||||||||||
Sbjct 391155 CAACAAGGAGTAGGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATAGAAACT 391096
Query 11971 TCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAAT 12030
|||||||| | || || || | || |||| | || || ||||| |||||
Sbjct 391095 CTTTGCCTCTGGAACTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 391036
Query 12031 ACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGT 12090
||| ||| || || ||||| || || | ||||| || | |||| ||| ||
Sbjct 391035 ACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGT-TTTCGT 390977
Query 12091 TAAT----TTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAA 12146
| || |||| |||||||| | ||| || || ||||| | ||||||| ||||||| |
Sbjct 390976 TCATTCTGTTATTCCAATCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGA 390917
Query 12147 AACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAA 12206
|| || | | | ||||| || |||||| ||||| ||||| |||||||||| ||
Sbjct 390916 AAGAGGCTTCGGCACGCTTATAAGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAA 390857
Query 12207 C 12207
|
Sbjct 390856 C 390856
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524700438480
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