Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq12 105 7e-18
>seq12
Length=1023116
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || | || ||||| || | |||||| ||||| |||||||||||||| |
Sbjct 60071 CCACCTCTCAATCTCAGCACTAAATGCAACGTAGATTCTTTCTGAATGTTATAATCAGAC 60130
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| ||| || |||||| || || ||||||||| | || || | ||| ||||| || ||
Sbjct 60131 AGTGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGG 60190
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| || |||||||| ||| || ||| | | || | ||||||| | || |||
Sbjct 60191 ATACCCTCTTTGTCTTGGATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 60250
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | ||| | || || || || | ||||| || || |||||||||
Sbjct 60251 TCTAGGGTTATAGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCATA 60298
Score = 91.5 bits (100), Expect = 1e-13
Identities = 141/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
||||| || ||||| ||||| || ||| || || || |||||| || || ||||||
Sbjct 59873 GTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCTTCCAGTTGCTTACCA 59932
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTT 139686
||| |||||| | || ||||| ||||| || ||||||||||| ||| |||||| ||
Sbjct 59933 GCAAAGATCAATCTCTGTTGATCTGGAGGAATACCTTCTTTGTC-CTGAATTTTTGACTT 59991
Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746
| | || | ||||| | | || ||||| | ||| | || || || |||| ||
Sbjct 59992 GACGTTATCAATAGTGTCAGACGATTCAACCTCGAGGGTTATGGTTTTACCCGTCAGTGT 60051
Query 139747 TTTTACGAATATTTGCATA 139765
|| ||||| || ||||||
Sbjct 60052 CTTAACGAAAATCTGCATA 60070
Score = 91.5 bits (100), Expect = 1e-13
Identities = 141/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| ||||| ||||| ||||| || ||| || || || |||||| || || ||||||
Sbjct 60557 GTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCTTCCAGTTGCTTACCA 60616
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTT 139686
||| |||||| | |||||||| ||||| || ||||||||||| ||| |||||| ||
Sbjct 60617 GCAAAGATCAATCTCTGCTGATCTGGAGGAATACCTTCTTTGTC-CTGAATTTTTGACTT 60675
Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746
| | || | || || | | || || || | || | || || |||||||| ||
Sbjct 60676 GACGTTATCAATAGTATCAGAAGATTCGACTTCCAATGTTATGGTTTTACCGGTCAAAGT 60735
Query 139747 TTTTACGAATATTTGCATA 139765
|| || || |||||||||
Sbjct 60736 CTTGACAAAAATTTGCATA 60754
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063894586400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |