Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq10 147 2e-30
>seq10
Length=743843
Score = 147 bits (162), Expect = 2e-30
Identities = 540/838 (64%), Gaps = 11/838 (1%)
Strand=Plus/Minus
Query 13351 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTA 13410
|| || ||||| || ||||| || ||| ||||| |||||||| ||||| || |||
Sbjct 391748 TTGGACATAACACCAGCCTTTTGGTAATCAGAGACTCTCTTTTCAAAGAAGTTGGTCTTA 391689
Query 13411 CCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATC 13469
|| ||| || || ||||||||||| ||||| || ||| | ||| | | ||| |
Sbjct 391688 CCAGCCAAGGAGATGTTTTCCATAAAGTCGAAGGGGTTT-TCGACCTTGTAGTATTTCTT 391630
Query 13470 ACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATC 13529
||| | | | || | ||| ||||||| ||||||| ||||| ||||| ||
Sbjct 391629 GTTACCAAAGGCGACCAAAAGTCTGTCAGCAACGAACTCAACGTATTGGTTCATTAGGTC 391570
Query 13530 ACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGA 13589
| |||||||||| | || || | || || || || ||| ||
Sbjct 391569 AGCGTTCATACCTAGCAAGGCAACTGGCAAGGCATCCAAGAAGTATCTTTGTTCAATTTC 391510
Query 13590 CACAGCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTT 13649
|||||||||| | | ||| | | || |||| | || | || | |||
Sbjct 391509 CACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATGGGC 391450
Query 13650 AAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGA 13709
|| | || || ||||| || || | || || ||||| | ||| | |||||| ||
Sbjct 391449 GAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGA 391390
Query 13710 AAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCC 13769
|| || || || ||||||| |||| || || ||||| || || | ||||| || ||
Sbjct 391389 GAAGGTCAAACCGGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGAACC 391330
Query 13770 GGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTT 13829
||| ||||| | || || | | ||||| || | ||||| ||| |||||| | || |
Sbjct 391329 GGAGAAGAAGACACCTTCGATAGAGGCAAAGGCGACTAGTCTTTCACCAAACAAGGCGTC 391270
Query 13830 TTTGT-TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTT 13888
|| |||| |||||| || |||||| || | || | || || || |
Sbjct 391269 AGCGTCTTGA-ATCCATCTTAGAGCCCACTCGGCCTTCTCACCGATTTCTGGGATGGTGT 391211
Query 13889 CGATTGCATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAG 13946
|| |||||||| || ||| | || |||| | ||||| |||| ||||| || |
Sbjct 391210 GAATGGCATTGAACAAGAATTCACTTTCCTTAGGGTCCTTGA--TGTAGGTATCGATCAA 391153
Query 13947 TAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCT 14006
||| || ||||||| || || ||||| || || || |||||||| |||| |
Sbjct 391152 CAAGGAGTAGGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATAGAAACTCTT 391093
Query 14007 AGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACC 14066
|| |||| ||| || || | | | || |||| ||||||||||||||||||||||
Sbjct 391092 TGCCTCTGGAACTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACC 391033
Query 14067 ATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAG 14126
||| ||| || ||||| || | | | |||||| || ||| | | ||| |
Sbjct 391032 GTCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTTTTCGTTCAT 390973
Query 14127 T---TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAA 14181
| || |||||||| | ||||||||| | ||| | ||| ||| | ||||| |||
Sbjct 390972 TCTGTTATTCCAATCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAA 390915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478588698299880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |