Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03- 21] 17 sequences; 12,092,810 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq10 147 2e-30 >seq10 Length=743843 Score = 147 bits (162), Expect = 2e-30 Identities = 540/838 (64%), Gaps = 11/838 (1%) Strand=Plus/Minus Query 13351 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTA 13410 || || ||||| || ||||| || ||| ||||| |||||||| ||||| || ||| Sbjct 391748 TTGGACATAACACCAGCCTTTTGGTAATCAGAGACTCTCTTTTCAAAGAAGTTGGTCTTA 391689 Query 13411 CCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATC 13469 || ||| || || ||||||||||| ||||| || ||| | ||| | | ||| | Sbjct 391688 CCAGCCAAGGAGATGTTTTCCATAAAGTCGAAGGGGTTT-TCGACCTTGTAGTATTTCTT 391630 Query 13470 ACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATC 13529 ||| | | | || | ||| ||||||| ||||||| ||||| ||||| || Sbjct 391629 GTTACCAAAGGCGACCAAAAGTCTGTCAGCAACGAACTCAACGTATTGGTTCATTAGGTC 391570 Query 13530 ACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGA 13589 | |||||||||| | || || | || || || || ||| || Sbjct 391569 AGCGTTCATACCTAGCAAGGCAACTGGCAAGGCATCCAAGAAGTATCTTTGTTCAATTTC 391510 Query 13590 CACAGCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTT 13649 |||||||||| | | ||| | | || |||| | || | || | ||| Sbjct 391509 CACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATGGGC 391450 Query 13650 AAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGA 13709 || | || || ||||| || || | || || ||||| | ||| | |||||| || Sbjct 391449 GAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGA 391390 Query 13710 AAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCC 13769 || || || || ||||||| |||| || || ||||| || || | ||||| || || Sbjct 391389 GAAGGTCAAACCGGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGAACC 391330 Query 13770 GGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTT 13829 ||| ||||| | || || | | ||||| || | ||||| ||| |||||| | || | Sbjct 391329 GGAGAAGAAGACACCTTCGATAGAGGCAAAGGCGACTAGTCTTTCACCAAACAAGGCGTC 391270 Query 13830 TTTGT-TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTT 13888 || |||| |||||| || |||||| || | || | || || || | Sbjct 391269 AGCGTCTTGA-ATCCATCTTAGAGCCCACTCGGCCTTCTCACCGATTTCTGGGATGGTGT 391211 Query 13889 CGATTGCATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAG 13946 || |||||||| || ||| | || |||| | ||||| |||| ||||| || | Sbjct 391210 GAATGGCATTGAACAAGAATTCACTTTCCTTAGGGTCCTTGA--TGTAGGTATCGATCAA 391153 Query 13947 TAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCT 14006 ||| || ||||||| || || ||||| || || || |||||||| |||| | Sbjct 391152 CAAGGAGTAGGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATAGAAACTCTT 391093 Query 14007 AGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACC 14066 || |||| ||| || || | | | || |||| |||||||||||||||||||||| Sbjct 391092 TGCCTCTGGAACTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACC 391033 Query 14067 ATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAG 14126 ||| ||| || ||||| || | | | |||||| || ||| | | ||| | Sbjct 391032 GTCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTTTTCGTTCAT 390973 Query 14127 T---TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAA 14181 | || |||||||| | ||||||||| | ||| | ||| ||| | ||||| ||| Sbjct 390972 TCTGTTATTCCAATCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAA 390915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588698299880