Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq12 96.9 2e-15
>seq12
Length=1023116
Score = 96.9 bits (106), Expect = 2e-15
Identities = 161/232 (69%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| ||||| || | || ||| |||||||| || || ||||| || || || ||||||||
Sbjct 60070 ACCACCTCTCAATCTCAGCACTAAATGCAACGTAGATTCTTTCTGAATGTTATAATCAGA 60129
Query 33202 CAAATTGAGTTG----GTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCG 33257
|| | ||| ||| |||| |||||| ||| ||| || | | ||| || || |
Sbjct 60130 CA----GTGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATAAGTCTTTGTTGATCTG 60185
Query 33258 TGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTT 33317
|| || || ||||| || ||| ||| || | | ||| |||||| | ||
Sbjct 60186 GTGGGATACCCTCTTTGTCTTGGATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATT 60245
Query 33318 GAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
||| || || ||||| ||||| || || |||||||| || |||||||||||
Sbjct 60246 CAACCTCTAGGGTTATAGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 60297
Score = 91.5 bits (100), Expect = 9e-14
Identities = 162/236 (69%), Gaps = 8/236 (3%)
Strand=Plus/Minus
Query 33141 CACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAG 33200
|||| ||||| || | ||| ||||| ||||| || || || ||||| || ||||| ||||
Sbjct 470263 CACCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAG 470204
Query 33201 ACAAATTGAGTTGG----TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCC 33256
||| ||||| || ||||||||||| ||| ||| || || | ||| |||||
Sbjct 470203 ACA----GAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCA 470148
Query 33257 GTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGT 33316
| || || ||||| || || ||| || || | | ||| ||||| | |
Sbjct 470147 GGTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGAT 470088
Query 33317 TGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372
| ||| || || || || || || || || | ||| || |||||||||||||| ||
Sbjct 470087 TCAACTTCTAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 470032
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| ||||||| | ||||||||||| || || || || ||||| || ||||| || ||
Sbjct 59842 ACCACCTCTTAGTCTTAACACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGA 59901
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
||| | ||| |||| |||||| ||| ||| || || | || || || | ||
Sbjct 59902 CAAGGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGG 59961
Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321
|| |||||||| || ||| || || | | ||| ||||| | || |||
Sbjct 59962 AATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATAGTGTCAGACGATTCAAC 60021
Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| || ||||| ||||| ||||| || || || |||||||| |||||
Sbjct 60022 CTCGAGGGTTATGGTTTTACCCGTCAGTGTCTTAACGAAAATCTGCAT 60069
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318777533953266
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |