Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq10 179 3e-40
>seq10
Length=743843
Score = 179 bits (198), Expect = 3e-40
Identities = 560/852 (66%), Gaps = 29/852 (3%)
Strand=Plus/Minus
Query 12842 TTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTT 12901
|| ||||||||| ||||| || || ||||| |||||||| ||||| || ||
Sbjct 391748 TTGGACATAACACCAGCCTTTTGGTAATCAGAGACTCTCTTTTCAAAGAAGTTGGTCTTA 391689
Query 12902 CCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAA-TAGTATTTTTT 12960
|| | || || || ||||||||||| ||||| || |||| ||| | |||||||| ||
Sbjct 391688 CCAGCCAAGGAGATGTTTTCCATAAAGTCGAAGGGGTTTT-CGACCTTGTAGTATTTCTT 391630
Query 12961 ACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATC 13020
|| || | | || | |||||||||||| ||||| | ||| || ||||||| ||
Sbjct 391629 GTTACCAAAGGCGACCAAAAGTCTGTCAGCAACGAACTCAACGTATTGGTTCATTAGGTC 391570
Query 13021 ACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGt---ttttttCTAT 13077
| |||||| |||| || || |||| || || || |||| ||| ||| ||
Sbjct 391569 AGCGTTCATACCTAGCAAGGCAACTGGCAAGGCATCC---AAGAAGTATCTTTGTTCAAT 391513
Query 13078 ATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGAT----A 13133
|| || || ||| | || || | | | | || | || || |||| | |
Sbjct 391512 TTCCACAGCCTCGGTGACAATTTTT-TCA--ACAATGGCTGGGTCTGG-TTTGTTCTTCA 391457
Query 13134 GATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCT 13193
||| |||| || |||||||| || |||||| ||||| ||||| | || | |
Sbjct 391456 AATGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATT 391397
Query 13194 CGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAA 13253
|||| || || || | ||| ||||| | |||| || || | ||| || || | || |
Sbjct 391396 CGTTAGAGAAGGTCAAACCGGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGA 391337
Query 13254 ACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACG 13313
| ||||| || || || | ||||| | | ||||| || | | ||||||||| ||
Sbjct 391336 AGGAACCGGAGAAGAAGACACCTTCGATAGAGGCAAAGGCGACTAGTCTTTCACCAAACA 391277
Query 13314 TACTATTTTTACTCTCTA-TCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTC 13372
| | ||| | |||| || ||||| | || || | || | |||
Sbjct 391276 -AGGCGTCAGCGTCTTGAATCCATCTTAGAGCCCACTCGGCCTTCTC----ACCGATTTC 391222
Query 13373 ----ATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGT 13428
|| | | || || || || || | | |||||||| ||| || || ||
Sbjct 391221 TGGGATGGTGTGAATGGCATTGAACAAGAATTCACTTTCCTTAGGGTCCTTGATGTAGGT 391162
Query 13429 ATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATA 13488
||| ||||| ||| || |||| |||||||||||||| ||| ||||||||||||||
Sbjct 391161 ATCGATCAACAAGGAGTAGGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATA 391102
Query 13489 AAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTT 13548
|||| | ||||||| || |||||||||| | | || |||| | |||||||| ||
Sbjct 391101 GAAACTCTTTGCCTCTGGAACTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATT 391042
Query 13549 AACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTT 13608
||| || |||||| ||| || ||||| ||||| | |||||| | | |||||
Sbjct 391041 AACAATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTT 390982
Query 13609 TTCTGACA-ACT-TTA-ACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGT 13665
||| || || ||| |||||| ||| ||| || || ||||| | || ||| ||||
Sbjct 390981 TTCGTTCATTCTGTTATTCCAATCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGT 390922
Query 13666 CCAAAAAGAAGC 13677
||| ||||| ||
Sbjct 390921 CCAGAAAGAGGC 390910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430982310705834
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |