Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq12 118 9e-22
>seq12
Length=1023116
Score = 118 bits (130), Expect = 9e-22
Identities = 160/223 (72%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 48512 CTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG 48571
|||||||| ||||| | ||| ||||||||| |||||||| || | ||| || ||
Sbjct 60539 CTTAACACCAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCG 60598
Query 48572 TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTG 48631
|| ||||| |||||||| | | || || | ||||||||| || | || ||| |||
Sbjct 60599 TCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGAGGAATACCTTCTTTG 60658
Query 48632 TCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691
||| |||||| ||||| | || ||||| | ||| || || | |||||||
Sbjct 60659 TCCTGAATTTTTGACTTGACGTTATCAATAGTATCAGAAGATTCGACTTCCAATGTTATG 60718
Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTGTCTT 48734
||||||||||| | ||| || |||||||| ||||| ||||||
Sbjct 60719 GTTTTACCGGTCAAAGTCTTGACAAAAATTTGCATAATGTCTT 60761
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 48512 CTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG 48571
|||||||| ||||| | || |||||||| |||||||| || | ||| || ||
Sbjct 59855 CTTAACACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCG 59914
Query 48572 TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTG 48631
|| ||||| |||||||| | | || || | ||| ||||| || | || ||| |||
Sbjct 59915 TCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATACCTTCTTTG 59974
Query 48632 TCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691
||| |||||| ||||| | || || || | || || ||||| ||||||
Sbjct 59975 TCCTGAATTTTTGACTTGACGTTATCAATAGTGTCAGACGATTCAACCTCGAGGGTTATG 60034
Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|||||||| || || || || || |||||||||||
Sbjct 60035 GTTTTACCCGTCAGTGTCTTAACGAAAATCTGCAT 60069
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421251112722017
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |