Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03- 21] 17 sequences; 12,092,810 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq12 118 9e-22 >seq12 Length=1023116 Score = 118 bits (130), Expect = 9e-22 Identities = 160/223 (72%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 48512 CTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG 48571 |||||||| ||||| | ||| ||||||||| |||||||| || | ||| || || Sbjct 60539 CTTAACACCAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCG 60598 Query 48572 TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTG 48631 || ||||| |||||||| | | || || | ||||||||| || | || ||| ||| Sbjct 60599 TCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGCTGATCTGGAGGAATACCTTCTTTG 60658 Query 48632 TCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691 ||| |||||| ||||| | || ||||| | ||| || || | ||||||| Sbjct 60659 TCCTGAATTTTTGACTTGACGTTATCAATAGTATCAGAAGATTCGACTTCCAATGTTATG 60718 Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTGTCTT 48734 ||||||||||| | ||| || |||||||| ||||| |||||| Sbjct 60719 GTTTTACCGGTCAAAGTCTTGACAAAAATTTGCATAATGTCTT 60761 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 48512 CTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG 48571 |||||||| ||||| | || |||||||| |||||||| || | ||| || || Sbjct 59855 CTTAACACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCG 59914 Query 48572 TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTG 48631 || ||||| |||||||| | | || || | ||| ||||| || | || ||| ||| Sbjct 59915 TCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATACCTTCTTTG 59974 Query 48632 TCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691 ||| |||||| ||||| | || || || | || || ||||| |||||| Sbjct 59975 TCCTGAATTTTTGACTTGACGTTATCAATAGTGTCAGACGATTCAACCTCGAGGGTTATG 60034 Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 |||||||| || || || || || ||||||||||| Sbjct 60035 GTTTTACCCGTCAGTGTCTTAACGAAAATCTGCAT 60069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421251112722017