Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03- 21] 17 sequences; 12,092,810 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq15 132 6e-26 seq2 113 5e-20 >seq15 Length=1078405 Score = 132 bits (146), Expect = 6e-26 Identities = 301/451 (67%), Gaps = 35/451 (8%) Strand=Plus/Plus Query 6810 TTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAAT 6869 ||||||||| | |||| || || || ||||| ||| ||||| || || |||||||| Sbjct 455988 TTGTTCTTTCAAGGCTTCAATGTGGTCCTTATAAACATGTGCATCCCCCAGAGTATGAAT 456047 Query 6870 AAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGA 6929 ||| |||||||| | ||| || ||| ||| |||||| | || || | ||||| || Sbjct 456048 AAACTCACCTGGCTCCATGTCGACAACTTTAGCAATCATTCTAGTCAACAGAGCATATGA 456107 Query 6930 AGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTG--ATAACAT---TGA 6984 || | |||||| ||||| || || ||||| || || | ||| |||||| ||| Sbjct 456108 TGCAATATTAAATGGTACTCCCAAGCCCATGTCACAAGAACGTTGGTATAACAAACATGA 456167 Query 6985 CAAGA------TAAAATATTG-------TCTATAG---------CATAAAATTGACACAA 7022 | | || | || ||| | | |||||||||| | || Sbjct 456168 AAGGCGGGGCTTACCAGATCCGTCTCCTTCTTTGGGGAAACTGACATAAAATTGTGAGAA 456227 Query 7023 TACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAA 7082 | || ||||| || ||| | || || | ||||| ||||||||||||| |||| | Sbjct 456228 AATGTGGCATGGTGGCAAAGCCATCTTGTCAAAATCAGCTGGATTCCAAGCACTCATAAT 456287 Query 7083 AATACGTCTATCATTTGGATTTGTTTTTAATTT-TGTTATAATTATTTG---TAATTGAT 7138 ||| | |||||||| |||||||| |||| ||| || ||| | || ||||||| Sbjct 456288 AATTCTTCTATCATAAGGATTTGTCTTTAGTTTATG----AATGACCTGCTTCAATTGAT 456343 Query 7139 CTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCC 7198 | |||||||| || |||| | || ||| | | || ||||| || ||||| |||| Sbjct 456344 CAATACCCTGTCCAGCATAGTCGTCATCACACGTCTTGTATTTAGCGCCGAAATGCCTCC 456403 Query 7199 ATTGAAACCCATAAATAGGACCTAAATCACC 7229 |||| || ||||||| || || ||||| || Sbjct 456404 ATTGGAATCCATAAACGGGCCCCAAATCCCC 456434 Score = 96.9 bits (106), Expect = 4e-15 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 19328 GTTAAAATTAAATTAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTT 19387 |||||| || ||||| || | || | ||| |||| ||||| || ||||| ||| | Sbjct 596747 GTTAAAGTTCGCGTAAGAACTACAAAGGTTCCTCAAATTGGTGACAAATTTGCCTCTCGT 596688 Query 19388 ACTGCTCAAAAAGGCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAA 19447 | |||||| || || |||||| | |||||| |||||||||||| ||||| | Sbjct 596687 CACGGTCAAAAGGGTACTATTGGTATCACATATCGTAGAGAAGATATGCCATTTACAGCA 596628 Query 19448 GATGGTATAGTGCCGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503 || ||||| || |||||| | || ||||| || || ||| ||||| ||| ||||| Sbjct 596627 GAAGGTATTGTTCCGGATTTAATCATTAATCCTCACGCTATTCCATCTCGTATGAC 596572 >seq2 Length=835812 Score = 113 bits (124), Expect = 5e-20 Identities = 385/591 (65%), Gaps = 32/591 (5%) Strand=Plus/Minus Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457 || |||||||| |||| || ||||| | ||| ||||||| || ||||| ||| || Sbjct 410234 AAGTTTGAAGATTTGGGTGTCGGTGGTTTGGATAAAGAATTTACTAAAATTTTTAGAAGA 410175 Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGG---CTGTAAACAT 164514 || ||||| | || |||| | | ||| |||| | || || | ||| Sbjct 410174 GCTTTTGCAAGTCGAATTTTTCCGCCTTCAGTTATAGAAAAGCTGGGTATCTCT---CAT 410118 Query 164515 ATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGC 164574 | ||||| | |||||| | || ||||| ||| ||||| || ||||| || || Sbjct 410117 GTTAAAGGTTTGTTATTATACGGTCCTCCGGGTACTGGTAAGACCTTAATTGCAAGAAAG 410058 Query 164575 ATTGCT-CAAGCTTTTAAATCGC---GACCCGTTAAAATTGTTAATGGTCCTGAATTATT 164630 |||| | ||| | | ||| | || || ||||| || || ||||||||| | || Sbjct 410057 ATTGGTACAA--TGCTGAATGCCAAAGAGCCC--AAAATCGTGAACGGTCCTGAAATTTT 410002 Query 164631 GAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGA 164690 || || || || ||| ||||| | ||| || | || ||||| |||| ||||||| Sbjct 410001 GAGTAAGTACGTTGGTTCTTCAGAGGAAAATATTCGTAATTTGTTCAAGGATGCTGAAGC 409942 Query 164691 AGAACAAAAGAAAGC--AGGTTTAGCTAGTAAA-TTACATGTTATTGTTTTTGATGAGAT 164747 |||| | | || ||| | || | |||||| | ||| |||| ||||| | Sbjct 409941 AGAATATCGG---GCCAAGGGTGAGGAATCCTCCTTACATATCATTATTTTCGATGAACT 409885 Query 164748 AGATGCTCTTTGCAAAAA---------ACGTGGTGATAATATTATTCATGATG-CAGTG- 164796 ||| || ||| ||| | | | |||||| || | | || || || Sbjct 409884 GGATTCTGTTTTCAAGCAGAGAGGTTCAAGAGGTGATGGTACCGGTGTAGGTGACAATGT 409825 Query 164797 -GTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGT 164855 |||||||| || | | ||||| |||||||| || || ||||||||||| || | Sbjct 409824 AGTTAATCAATTATTAGCCAAAATGGATGGTGTTGATCAATTGAATAATATTTTGGTTAT 409765 Query 164856 AGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGA 164915 |||||||||||||| |||||||| ||| |||| | ||||| || ||| |||| || Sbjct 409764 TGGTATGACCAACCGTAAGGATTTAATAGATAGTGCTCTTTTACGTCCAGGTAGATTTGA 409705 Query 164916 ATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTT 164966 | | || | ||||| ||||| || || ||||| | || |||||||| Sbjct 409704 AGTCCAAGTTGAAATTCATTTACCGGATGAAAAAGGAAGACTCCAAATTTT 409654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871873377200