Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq15 132 6e-26
seq2 113 5e-20
>seq15
Length=1078405
Score = 132 bits (146), Expect = 6e-26
Identities = 301/451 (67%), Gaps = 35/451 (8%)
Strand=Plus/Plus
Query 6810 TTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAAT 6869
||||||||| | |||| || || || ||||| ||| ||||| || || ||||||||
Sbjct 455988 TTGTTCTTTCAAGGCTTCAATGTGGTCCTTATAAACATGTGCATCCCCCAGAGTATGAAT 456047
Query 6870 AAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGA 6929
||| |||||||| | ||| || ||| ||| |||||| | || || | ||||| ||
Sbjct 456048 AAACTCACCTGGCTCCATGTCGACAACTTTAGCAATCATTCTAGTCAACAGAGCATATGA 456107
Query 6930 AGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTG--ATAACAT---TGA 6984
|| | |||||| ||||| || || ||||| || || | ||| |||||| |||
Sbjct 456108 TGCAATATTAAATGGTACTCCCAAGCCCATGTCACAAGAACGTTGGTATAACAAACATGA 456167
Query 6985 CAAGA------TAAAATATTG-------TCTATAG---------CATAAAATTGACACAA 7022
| | || | || ||| | | |||||||||| | ||
Sbjct 456168 AAGGCGGGGCTTACCAGATCCGTCTCCTTCTTTGGGGAAACTGACATAAAATTGTGAGAA 456227
Query 7023 TACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAA 7082
| || ||||| || ||| | || || | ||||| ||||||||||||| |||| |
Sbjct 456228 AATGTGGCATGGTGGCAAAGCCATCTTGTCAAAATCAGCTGGATTCCAAGCACTCATAAT 456287
Query 7083 AATACGTCTATCATTTGGATTTGTTTTTAATTT-TGTTATAATTATTTG---TAATTGAT 7138
||| | |||||||| |||||||| |||| ||| || ||| | || |||||||
Sbjct 456288 AATTCTTCTATCATAAGGATTTGTCTTTAGTTTATG----AATGACCTGCTTCAATTGAT 456343
Query 7139 CTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCC 7198
| |||||||| || |||| | || ||| | | || ||||| || ||||| ||||
Sbjct 456344 CAATACCCTGTCCAGCATAGTCGTCATCACACGTCTTGTATTTAGCGCCGAAATGCCTCC 456403
Query 7199 ATTGAAACCCATAAATAGGACCTAAATCACC 7229
|||| || ||||||| || || ||||| ||
Sbjct 456404 ATTGGAATCCATAAACGGGCCCCAAATCCCC 456434
Score = 96.9 bits (106), Expect = 4e-15
Identities = 127/176 (72%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 19328 GTTAAAATTAAATTAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTT 19387
|||||| || ||||| || | || | ||| |||| ||||| || ||||| ||| |
Sbjct 596747 GTTAAAGTTCGCGTAAGAACTACAAAGGTTCCTCAAATTGGTGACAAATTTGCCTCTCGT 596688
Query 19388 ACTGCTCAAAAAGGCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAA 19447
| |||||| || || |||||| | |||||| |||||||||||| ||||| |
Sbjct 596687 CACGGTCAAAAGGGTACTATTGGTATCACATATCGTAGAGAAGATATGCCATTTACAGCA 596628
Query 19448 GATGGTATAGTGCCGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503
|| ||||| || |||||| | || ||||| || || ||| ||||| ||| |||||
Sbjct 596627 GAAGGTATTGTTCCGGATTTAATCATTAATCCTCACGCTATTCCATCTCGTATGAC 596572
>seq2
Length=835812
Score = 113 bits (124), Expect = 5e-20
Identities = 385/591 (65%), Gaps = 32/591 (5%)
Strand=Plus/Minus
Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457
|| |||||||| |||| || ||||| | ||| ||||||| || ||||| ||| ||
Sbjct 410234 AAGTTTGAAGATTTGGGTGTCGGTGGTTTGGATAAAGAATTTACTAAAATTTTTAGAAGA 410175
Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGG---CTGTAAACAT 164514
|| ||||| | || |||| | | ||| |||| | || || | |||
Sbjct 410174 GCTTTTGCAAGTCGAATTTTTCCGCCTTCAGTTATAGAAAAGCTGGGTATCTCT---CAT 410118
Query 164515 ATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGC 164574
| ||||| | |||||| | || ||||| ||| ||||| || ||||| || ||
Sbjct 410117 GTTAAAGGTTTGTTATTATACGGTCCTCCGGGTACTGGTAAGACCTTAATTGCAAGAAAG 410058
Query 164575 ATTGCT-CAAGCTTTTAAATCGC---GACCCGTTAAAATTGTTAATGGTCCTGAATTATT 164630
|||| | ||| | | ||| | || || ||||| || || ||||||||| | ||
Sbjct 410057 ATTGGTACAA--TGCTGAATGCCAAAGAGCCC--AAAATCGTGAACGGTCCTGAAATTTT 410002
Query 164631 GAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGA 164690
|| || || || ||| ||||| | ||| || | || ||||| |||| |||||||
Sbjct 410001 GAGTAAGTACGTTGGTTCTTCAGAGGAAAATATTCGTAATTTGTTCAAGGATGCTGAAGC 409942
Query 164691 AGAACAAAAGAAAGC--AGGTTTAGCTAGTAAA-TTACATGTTATTGTTTTTGATGAGAT 164747
|||| | | || ||| | || | |||||| | ||| |||| ||||| |
Sbjct 409941 AGAATATCGG---GCCAAGGGTGAGGAATCCTCCTTACATATCATTATTTTCGATGAACT 409885
Query 164748 AGATGCTCTTTGCAAAAA---------ACGTGGTGATAATATTATTCATGATG-CAGTG- 164796
||| || ||| ||| | | | |||||| || | | || || ||
Sbjct 409884 GGATTCTGTTTTCAAGCAGAGAGGTTCAAGAGGTGATGGTACCGGTGTAGGTGACAATGT 409825
Query 164797 -GTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGT 164855
|||||||| || | | ||||| |||||||| || || ||||||||||| || |
Sbjct 409824 AGTTAATCAATTATTAGCCAAAATGGATGGTGTTGATCAATTGAATAATATTTTGGTTAT 409765
Query 164856 AGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGA 164915
|||||||||||||| |||||||| ||| |||| | ||||| || ||| |||| ||
Sbjct 409764 TGGTATGACCAACCGTAAGGATTTAATAGATAGTGCTCTTTTACGTCCAGGTAGATTTGA 409705
Query 164916 ATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTT 164966
| | || | ||||| ||||| || || ||||| | || ||||||||
Sbjct 409704 AGTCCAAGTTGAAATTCATTTACCGGATGAAAAAGGAAGACTCCAAATTTT 409654
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595871873377200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |