Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq14 111 2e-20
seq2 104 4e-18
>seq14
Length=778926
Score = 111 bits (122), Expect = 2e-20
Identities = 189/269 (70%), Gaps = 4/269 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| | |||| |||| |||||||||| ||||| ||||| |||||||||||
Sbjct 568232 GCTAAGCGTCACAGAAAGAT-TCTTAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 568290
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | ||| | | || || ||||||||| ||||||| ||| |||| ||||| |
Sbjct 568291 TAGAAGATTAGCTAGAAGAGGCGGTGTCAAGCGTATCTCTGGTTTGATCTACGAAGAAGT 568350
Query 16552 TCGTGATGTTTTGAAGATC-TTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
| | ||| ||||| ||| ||| | | |||| ||| || || | || || |
Sbjct 568351 CAGAGCTGTCTTGAA-ATCGTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACTG 568409
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
| ||||| || | |||||||| || || ||||| | || || || ||||| | ||||
Sbjct 568410 AACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTACGCTTTGAAGAGACAAG 568469
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | | | |||||||| || |||||
Sbjct 568470 GTAGAACCTTATATGGTTTCGGTGGTTAA 568498
>seq2
Length=835812
Score = 104 bits (114), Expect = 4e-18
Identities = 188/270 (70%), Gaps = 4/270 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| | | ||| ||| |||||||||| ||||| ||||| |||||||||||
Sbjct 270645 GCTAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 270587
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | || | | ||||| ||||||||| ||||||| ||| |||| ||||| |
Sbjct 270586 TAGAAGATTAGCCAGAAGAGGTGGTGTCAAGCGTATCTCTGGTTTGATCTACGAAGAAGT 270527
Query 16552 TCGTGATGTTTTGAAGATC-TTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
| | ||| ||||| ||| ||| | | | || ||| || || | || || |
Sbjct 270526 CAGAGCTGTCTTGAA-ATCGTTCTTGGAATCTGTCATCAGAGACTCTGTTACTTACACTG 270468
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
| ||||| || | |||||||| || || ||||| | || || || ||||| | ||||
Sbjct 270467 AACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTACGCTTTGAAGAGACAAG 270408
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAAT 16700
| | | | |||||||| || ||||||
Sbjct 270407 GTAGAACCTTATATGGTTTCGGTGGTTAAT 270378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075184456781
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |