Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03- 21] 17 sequences; 12,092,810 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq10 98.7 1e-15 >seq10 Length=743843 Score = 98.7 bits (108), Expect = 1e-15 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 21467 AACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAA 21526 |||| ||| |||||||| || ||||||||||| || || | || ||||| ||||| Sbjct 391448 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAG 391389 Query 21527 AATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCT 21586 || || ||||||||||| | |||||||| || ||||| || || || || || | || Sbjct 391388 AAGGTCAAACCGGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGAACCG 391329 Query 21587 GAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACC 21633 || ||||| | || || | | ||||| || |||| || |||||| Sbjct 391328 GAGAAGAAGACACCTTCGATAGAGGCAAAGGCGACTAGTCTTTCACC 391282 Score = 95.1 bits (104), Expect = 1e-14 Identities = 158/227 (70%), Gaps = 5/227 (2%) Strand=Plus/Minus Query 21774 TTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAAC 21833 |||||||||| |||||||| ||| || || || || || |||| ||||||||| | Sbjct 391141 TTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATAGAAACTCTTTGCCTCTGGAA 391082 Query 21834 ATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGG 21893 |||||| |||| | || || | ||||||||||||| || || || ||| |||| Sbjct 391081 CTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGG 391022 Query 21894 CAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT----TTTTTC 21949 | ||||| || | | | |||||| ||| ||||| || ||| || || ||| Sbjct 391021 CGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTTTTC-GTTCATTCTGTTATTC 390963 Query 21950 CAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996 ||||| | ||| || || ||||| | |||||||| ||||| || Sbjct 390962 CAATCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAA 390916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900686971080