Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03-
21] 17 sequences; 12,092,810 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq5 230 6e-55
seq15 116 1e-20
>seq5
Length=565208
Score = 230 bits (254), Expect = 6e-55
Identities = 1037/1626 (64%), Gaps = 53/1626 (3%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
|| || || ||| | ||||| ||| |||||||| |||| || || || ||||| |||
Sbjct 295421 TTTACTCATGCCTCTCCAACTTTGTTTAATGCTGGTACTCCAAAACCTCAAATGTCCTCT 295480
Query 363607 TGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665
|| |||||| | |||||||| || || ||||||||||| | ||||| | || |
Sbjct 295481 TG-TTTCTTGGTCGCCATGAAGGAGGACTCTATCGAGGGTATTTACGACACTTTGAAAGA 295539
Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725
|||||| | |||||||| | ||| || || |||||| || ||||| ||| ||||| |
Sbjct 295540 ATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAATATTCGTTC 295599
Query 363726 ACAGAACAG----TTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGC 363781
||| | ||||||| || ||| || ||| || ||| | ||||||||
Sbjct 295600 ----AACTGGTTCTTACATTGCTGGTACAAACGGTACCTCTAACGGGTTAATTCCCATGA 295655
Query 363782 TTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAGG 363839
||||||| ||| | || || || | || |||||||||||||| | |||| | ||
Sbjct 295656 TTCGTGTTTTTAATAACACCGCCCGTTATGTCGACCAGGGTGGTAACAAAAGACC--TGG 295713
Query 363840 GGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCG 363899
|| ||||| |||| || || || ||||| ||||||||||| ||| |||| || |
Sbjct 295714 CGCCTTTGCCCTGTACCTGGAACCATGGCATGCTGATATTTTTGATTTTATTGATATCAG 295773
Query 363900 GAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTC 363959
|| ||| || ||||| ||| | |||||| | ||| |||| ||| || ||| || |
Sbjct 295774 AAAGAACCACGGTAAAGAAGAAATTCGTGCAAGAGATTTGTTTCCTGCTCTATGGATTCC 295833
Query 363960 TGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGA 364019
||| | ||| |||||||| || || | | || |||| | | || | ||| |
Sbjct 295834 TGATCTTTTCATGAAGCGTGTTGAAGAGAATGGGACTTGGACTTTGTTCTCTCCAACAGC 295893
Query 364020 ATGTCCAGGTCTTTCCGA-TGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATG 364078
||| ||||| ||| ||| | || ||||| | || |||||||| || |
Sbjct 295894 CGCTCCTGGTCTAAGCGACTGT-TATGGCGACGAGTTTGAAGCTCTATATACCCGCTACG 295952
Query 364079 AATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137
|| | ||| | | | ||||||| ||| || || || |||||| | |||| ||
Sbjct 295953 AA----AAAGAAGGTCGTGGTAAGACCATTAAGGCTCAAAAATTATGGTATTCCATTTTG 296008
Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197
|| | || | ||| || || ||||| | | | | || || ||| | |||||| | |||
Sbjct 296009 GAAGCACAAACTGAAACGGGTACACCTTTTGTCGTTTATAAGGATGCTTGCAACAGAAAG 296068
Query 364198 TCCAACCAGCAGCACCTTGGT----ACAATTCAGCAGAGCAACCTATGTACCGAGATTAT 364253
|| ||||| | || | ||| ||| ||| || ||| |||| || ||| |
Sbjct 296069 TCTAACCAAAAAAACTTAGGTGTTATCAAGTCATCA----AACTTATGCTGTGAAATTGT 296124
Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313
||| ||| | ||||| ||||| ||||| || |||||| | || || | || | || ||
Sbjct 296125 TGAGTACTCAGCTCCGGACGAAACTGCTGTTTGTAACTTGGCTTCTGTTGCCTTGCCAGC 296184
Query 364314 GT---TTGTAA------AAGATGG---TACTTTTGACCACCAGCATC-----TTTATGAC 364356
| ||| || | || || |||| | || || | || ||| ||
Sbjct 296185 ATTCATTGAAACGTCAGAGGACGGCCAAACTTCT-ACATACAACTTCAAAAAATTA-CAC 296242
Query 364357 GTAA---CCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCA 364413
| || || | || |||| | ||| | ||| ||||| || ||||| || ||
Sbjct 296243 GAAATTGCCAAAGTTGTTACTCGTAATTTAAACAGAGTTATTGATCGTAATTACTACCCT 296302
Query 364414 ATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGC 364473
|| ||||| | | || |||||| | ||| | || |||| | | ||||| || ||
Sbjct 296303 GTTGAAGAAGCGAAAAGATCCAATATGAGACATAGACCAATTGCTTTGGGTGTTCAAGGT 296362
Query 364474 CTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTA 364533
| |||||| ||| ||| |||| | | |||||||| || || ||| | |||
Sbjct 296363 TTGGCTGACACTTTCATGTTGCTACGTTTACCCTTTGATTCTGAAGAGGCCCGTTTACTA 296422
Query 364534 AATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCA 364593
|||| | |||||||||||||| ||| |||| | ||| ||||| ||||| | ||
Sbjct 296423 AATATCCAAATCTTTGAAACAATTTATCATGCCTCTATGGAAGCTTCTTGTGAACTAGCT 296482
Query 364594 AAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAG 364653
||| | ||| ||| || | | || || || ||| || || | | | |||
Sbjct 296483 CAAAAGGACGGACCATACGAAACCTTCCAAGGTTCTCCAGCTTCTCAAGGTATACTTCAG 296542
Query 364654 TTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAAC 364713
|| ||| | ||| | | || | | | ||| | |||||||| | | |
Sbjct 296543 TTCGATATGTGGGACCAAAAACCCTACGGCATGTGGGATTGGGATACTTTGAGGGAAGAT 296602
Query 364714 GTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACT 364773
|| | ||||||||||| | | ||||| | | || || ||||| || || || ||
Sbjct 296603 GTCATGAAGCATGGTATTAGAAACTCTTTGACCATGGCACCAATGCCTACTGCATCCACG 296662
Query 364774 GCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGC 364833
| || || | || | || || || || ||||| |||| |||| | || || ||
Sbjct 296663 TCCCAAATATTGGGTTATAATGAATGTTTTGAACCAGTTACCTCCAATATGTACTCCCGT 296722
Query 364834 CGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGAC 364893
|| || | ||||| ||||| | || || || ||| || | ||| | ||
Sbjct 296723 CGTGTCTTATCCGGTGAATTCCAAGTTGTGAACCCTTACTTACTACGCGATTTGGTTGAT 296782
Query 364894 CGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAG 364953
|| | |||| ||| | ||||| | ||| | || | || || || | ||
Sbjct 296783 TTAGGTATTTGGGATGAGGGTATGAAACAGTATTTGATTACACAGAACGGCTCCATTCAA 296842
Query 364954 AACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTC- 365012
| ||| ||||| |||| ||||| | | |||||||| || |||||||||||
Sbjct 296843 GGTTTACCAAATGTTCCACAAGAATTGAAGGATTTATACAAAACTGTCTGGGAAATTTCA 296902
Query 365013 CATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTC 365072
|| | ||| ||||| | ||||| |||||||| || || |||| ||| || ||
Sbjct 296903 CAAAAG-ACTATCATTAACATGGCAGCCGATCGTTCTGTTTATATCGATCAATCTCATTC 296961
Query 365073 GTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGG 365132
|| || | ||| || | ||||| | ||||| ||| |||||||| |||||
Sbjct 296962 ATTGAATTTGTTCTTGCGTGCCCCAACTATGGGTAAGCTAACAAGTATGCATTTTTACGG 297021
Query 365133 GTGGAA 365138
||||||
Sbjct 297022 GTGGAA 297027
>seq15
Length=1078405
Score = 116 bits (128), Expect = 1e-20
Identities = 208/299 (70%), Gaps = 10/299 (3%)
Strand=Plus/Minus
Query 111419 TGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTC-G 111477
||| || |||||||| || |||||||| ||||| | ||||||| || ||| || | |
Sbjct 456504 TGTTAAGATTTGGGACGGTAATGGATCCCGTGAATATCTAGATA-AGATGGGGTTCACAG 456446
Query 111478 ACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAG 111537
| | ||| || ||| | || || ||||| ||||| |||||| | || || || ||
Sbjct 456445 ATAGGAAAGTGGGGGATTTGGGGCCCGTTTATGGATTCCAATGGAGGCATTTCGGCGCTA 456386
Query 111538 ACTACAAAACC----ATGCACGACTCATATGATTCACAGGGAACTGATCAATTACAGAAT 111593
| ||||| || ||| |||||| ||| | |||||| | ||||||||| || |
Sbjct 456385 AATACAAGACGTGTGATG-ACGACT---ATGCTGGACAGGGTATTGATCAATTGAAGCAG 456330
Query 111594 GTCATTGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAAC 111653
|||||| || || | |||| || || | | | | |||||||||||||| |||||
Sbjct 456329 GTCATTCATAAACTAAAGACAAATCCTTATGATAGAAGAATTATTATGAGTGCTTGGAAT 456270
Query 111654 CCAAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712
||| || || || || ||||| | |||||||| || || | | || ||||||||
Sbjct 456269 CCAGCTGATTTTGACAAGATGGCTTTGCCACCATGCCACATTTTCTCACAATTTTATGT 456211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353316113294
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |