Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03- 21] 17 sequences; 12,092,810 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq12 141 8e-29 seq9 100 2e-16 >seq12 Length=1023116 Score = 141 bits (156), Expect = 8e-29 Identities = 171/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| ||||||| ||| | || ||| | || || || | | Sbjct 60297 ATGCAAATTTTTGTCAAAACTCTAACTGGTAAAACTATAACCCTAGAGGTTGAATCTTCC 60238 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | |||||| ||||| |||||||| || || || || |||||| Sbjct 60237 GACACTATTGACAACGTCAAAAGTAAGATCCAAGACAAAGAGGGTATCCCACCAGATCAA 60178 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-AC-GTCAGCGATTATA 24168 || ||||| |||| | || |||||||| ||||| | |||| || ||| | |||||| Sbjct 60177 CAAAGACTTATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACACTGTCTG--ATTATA 60120 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||| ||||||||||| | ||||||||| | ||||||||||| || Sbjct 60119 ACATTCAGAAAGAATCTACGTTGCATTTAGTGCTGAGATTGAGAGGTGG 60071 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || ||| | || || ||| | || ||| |||| || || | Sbjct 60069 ATGCAGATTTTCGTTAAGACACTGACGGGTAAAACCATAACCCTCGAGGTTGAATCGTCT 60010 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | ||||| ||| ||| ||||||||||| || ||||| |||||| Sbjct 60009 GACACTATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGATCAA 59950 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | | || |||||||| ||||| | |||| | | ||| || ||| Sbjct 59949 CAGAGATTGATCTTTGCTGGTAAGCAACTGGAAGACGGTAGAACCTTGTCCGACTACAAC 59890 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| |||||||| | ||||| ||||||||| | ||||| || Sbjct 59889 ATCCAAAAGGAATCTACTTTACATTTGGTGTTAAGACTAAGAGGTGG 59843 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||| || | ||||| | || ||||| | | Sbjct 60525 ATGCAGATCTTTGTTAAGACGCTGACTGGTAAGACCATTACTCTGGAGGTCGAATCTTCC 60466 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | ||||| || ||| || || ||||| || ||||| || ||| Sbjct 60465 GACACGATTGACAACGTCAAGTCGAAAATTCAAGATAAGGAAGGTATTCCTCCAGACCAA 60406 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 |||||| |||||| | ||| |||||||| ||||||| |||| ||| | | || || || Sbjct 60405 CAGAGATTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAA-CGTTATCCGACTACAA 60347 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||| |||||||| | || || || || ||||||||||| || Sbjct 60346 TATTCAAAAGGAATCTACTCTCCACTTGGTCTTGAGATTGAGAGGTGG 60299 Score = 113 bits (124), Expect = 4e-20 Identities = 171/242 (71%), Gaps = 1/242 (0%) Strand=Plus/Minus Query 23977 TTTAGCCAA-ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATC 24035 |||| | || ||| |||||| | ||||| || || || || || ||| | || || | Sbjct 60768 TTTAACTAAGACATTATGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTG 60709 Query 24036 GAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGC 24095 |||||||| | || || || || | ||||| ||| ||| ||||||||||| Sbjct 60708 GAAGTCGAATCTTCTGATACTATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGT 60649 Query 24096 ATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAAC 24155 || ||||| ||||| |||||| |||| | | || |||||||| ||||| | |||| | Sbjct 60648 ATTCCTCCAGATCAGCAGAGATTGATCTTTGCTGGTAAGCAACTGGAAGACGGTAGAACC 60589 Query 24156 GTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGA 24215 | ||| || ||||| ||||| || || || | ||||| ||||||||| | ||||| Sbjct 60588 TTGTCCGACTACAACATCCAAAAGGAGTCCACTTTACATTTGGTGTTAAGACTAAGAGGT 60529 Query 24216 GG 24217 || Sbjct 60528 GG 60527 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| |||||| | || || || || ||||| || || | |||||| | ||||| || | Sbjct 470031 CAAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTAGAAGTTGAATC 470090 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 ||||| || || | ||||| ||||| ||||| ||||| || || || || Sbjct 470091 TTCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGA 470150 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 ||||| ||| |||| | | || |||||| | ||||||| ||||| | || || Sbjct 470151 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTCTGTCTGACTA 470210 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||| |||||||| | || || || || ||||||||||| || Sbjct 470211 CAACATCCAAAAGGAATCTACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 470261 >seq9 Length=443128 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059 ||||| || || || ||||| || | || || | ||||| || | ||||| || Sbjct 63084 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 63143 Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119 || | ||||| ||||||| ||||| ||||| || || || || ||||| ||| || Sbjct 63144 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 63203 Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179 || | | || |||||| | ||||| | |||| | | || || |||||||||||| Sbjct 63204 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 63263 Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || | || ||||| || ||||||||||| || Sbjct 63264 GAATCCACTTTACACTTAGTCTTGAGATTGAGAGGTGG 63301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935910922635